Sequence 1: | NP_608558.1 | Gene: | CG4341 / 33276 | FlyBaseID: | FBgn0028481 | Length: | 938 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001121486.1 | Gene: | tmtc4 / 100158586 | XenbaseID: | XB-GENE-5771787 | Length: | 738 | Species: | Xenopus tropicalis |
Alignment Length: | 875 | Identity: | 245/875 - (28%) |
---|---|---|---|
Similarity: | 366/875 - (41%) | Gaps: | 243/875 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 SLAFVLYLNTLGAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLCVLSF 104
Fly 105 RLNYLIGGGFAPWGFHLVNNLLHCVATALVVRVARTLLASVW-------------AVLAAGALFA 156
Fly 157 AHPIHTEAVAGVVGRADLAACVCYLLTYLSYLRHMRWRESGDPRQ-WLALGATLILAAAGLLCKE 220
Fly 221 TAITALLVCALFDVM-------------------RGLSGQVDKQRL--RSVCIVLGALFCMAYCR 264
Fly 265 LVIVPGPQTAFSSADNPIARTPSAWTRLLTFLYLPVFNLRLLLQPNVLSFDWGMDALPRVTSLWD 329
Fly 330 RRNAQSACFYSVLVGVAWGSCRQLLSGSKEVTHCGVSSTFPQYHIQKVASRKSRSKRKRLANNTK 394
Fly 395 YQAFEAAYHQQQQEALPCRDCNNNNSSGYVYEGSSPVAQAPAQAPHLVSSAFRGSRSSSSCSNST 459
Fly 460 NSSSSSSSSSSSSSSSSSSLSGGFQCSSKDYALEGMSPANRHACVLIMSLSFLALPFLPASNLLF 524
Fly 525 YVGFVVAERLLYLPSVGFCLLVGYGVSKLMSCNQRTRNILLLSFSLL-LAAMS-LRTLRRNADWR 587
Fly 588 DEESLYRSAIAINP---------------------------------PK---ALGNLGSVLSSQG 616
Fly 617 RYEEAKQVLQEAIRFRPNMADVHFNLGILHQNQQVYPAAVECFQRAIKFRPNLAVAYLNLGISFI 681
Fly 682 ALGKRQQAIEILQAGSNLDGAAVRDRTAHDQARSSAYLQLGALYVEQGKLQRALAIYREALSSLP 746
Fly 747 GLPQQREILYQRIGDVLGRLQQWDEAERHHRAALELQPNQVAAHLSYGITLARNSSRASEAEMWF 811
Fly 812 KRALKLAPEQASVYHHYA----EFLSLQSR 837 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4341 | NP_608558.1 | PMT_2 | 112..>232 | CDD:304453 | 51/133 (38%) |
DUF1736 | 275..343 | CDD:285594 | 22/67 (33%) | ||
TPR_11 | 602..667 | CDD:290150 | 22/67 (33%) | ||
TPR_1 | 602..634 | CDD:278916 | 12/34 (35%) | ||
TPR repeat | 602..630 | CDD:276809 | 12/30 (40%) | ||
TPR repeat | 635..665 | CDD:276809 | 8/29 (28%) | ||
TPR_11 | 636..700 | CDD:290150 | 16/63 (25%) | ||
TPR_1 | 636..668 | CDD:278916 | 10/31 (32%) | ||
TPR repeat | 670..694 | CDD:276809 | 6/23 (26%) | ||
TPR_11 | 714..784 | CDD:290150 | 23/69 (33%) | ||
TPR repeat | 715..743 | CDD:276809 | 11/27 (41%) | ||
TPR repeat | 748..782 | CDD:276809 | 10/33 (30%) | ||
TPR_11 | 755..819 | CDD:290150 | 14/63 (22%) | ||
TPR repeat | 787..816 | CDD:276809 | 3/28 (11%) | ||
TPR_11 | 821..887 | CDD:290150 | 4/21 (19%) | ||
TPR repeat | 822..850 | CDD:276809 | 4/20 (20%) | ||
TPR repeat | 855..885 | CDD:276809 | |||
TPR_11 | <874..921 | CDD:290150 | |||
TPR repeat | 890..918 | CDD:276809 | |||
tmtc4 | NP_001121486.1 | DUF1736 | 288..362 | CDD:369859 | 23/73 (32%) |
TPR | 423..708 | CDD:223533 | 81/303 (27%) | ||
TPR repeat | 478..506 | CDD:276809 | 0/27 (0%) | ||
TPR repeat | 514..540 | CDD:276809 | 10/25 (40%) | ||
TPR repeat | 545..575 | CDD:276809 | 8/29 (28%) | ||
TPR repeat | 580..606 | CDD:276809 | 8/36 (22%) | ||
TPR repeat | 614..642 | CDD:276809 | 11/27 (41%) | ||
TPR repeat | 647..677 | CDD:276809 | 8/30 (27%) | ||
TPR repeat | 682..710 | CDD:276809 | 3/28 (11%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1320023at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |