DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4341 and tmtc3

DIOPT Version :9

Sequence 1:NP_608558.1 Gene:CG4341 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_031754762.1 Gene:tmtc3 / 100145573 XenbaseID:XB-GENE-5884137 Length:927 Species:Xenopus tropicalis


Alignment Length:944 Identity:245/944 - (25%)
Similarity:381/944 - (40%) Gaps:267/944 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SLAFVLYLNTLGAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLCVLSF 104
            |:.|:.|.|:|..|||:||..|||.|.|:...||.::.|.|||||||:::..||.|:|||.||:|
 Frog    17 SVIFLCYWNSLFCGFVFDDVSAILDNKDLHPSTPLKKLFQNDFWGTPMSEERSHKSYRPLTVLTF 81

  Fly   105 RLNYLIGGGFAPWGFHLVNNLLHCVATALVVRVARTLLASVWAVLAAGALFAAHPIHTEAVAGVV 169
            |||||.....|. .:|.:|.:||.|...:.::|.|..:.:..::||. .|||.||||||||.|||
 Frog    82 RLNYLFSELNAV-SYHFLNVVLHAVVCIVFLKVCRLFMDTKISLLAT-LLFAVHPIHTEAVTGVV 144

  Fly   170 GRADLAACVCYLLTYLSYLRHMRWRESGDPRQ---WLALGATLILAAAGLLCKETAITALLVCAL 231
            |||:|.:.:..|..:|||.:      |..|..   |..:...:.|.|...||||..||.:.:|.:
 Frog   145 GRAELLSSIFLLAAFLSYTK------SKGPDNSIVWTPIAVAVFLVAVATLCKEQGITVVGICCV 203

  Fly   232 FDV---------------MRGLSGQVD-----KQRLRSVCIVLGALFCMAYCRLVIVPGPQTAFS 276
            ::|               ::.|.|:..     .|.|..:.:::.:...:...|:.::......|:
 Frog   204 YEVFIAQGYTFPVLWDTTLQILMGKGSIPYSMLQTLLKLIVLMFSTLLLVVVRVQVIQSQLPVFT 268

  Fly   277 SADNP--IARTPSAWTRLLTFLYLPVFNLRLLLQPNVLSFDWGMDALPRVTSLWDRRNAQSACFY 339
            ..|||  ::.||:   |.|||.||...|..|||.|:.|..||.|..:|.:.|:.|.||..:..||
 Frog   269 RFDNPAAVSTTPA---RQLTFNYLLPVNAWLLLNPSELCCDWTMGTIPLIESILDIRNLATLLFY 330

  Fly   340 SVLVGVAWGSCRQLLSGSKEVTHCGVSSTFPQYHIQKVASRKSRSKRKRLANNTKYQAFEAAYHQ 404
            .:|                                                              
 Frog   331 FLL-------------------------------------------------------------- 333

  Fly   405 QQQEALPCRDCNNNNSSGYVYEGSSPVAQAPAQAPHLVSSAFRGSRSSSSCSNSTNSSSSSSSSS 469
                             ||                 |:..:.|.|..||.               
 Frog   334 -----------------GY-----------------LIVFSVRYSGDSSK--------------- 349

  Fly   470 SSSSSSSSSLSGGFQCSSKDYALEGMSPANRHACVLIMSLSFLALPFLPASNLLFYVGFVVAERL 534
                                              .::|:|..:.|||:|||||.|.||||||||:
 Frog   350 ----------------------------------TVLMALCLIILPFIPASNLFFPVGFVVAERV 380

  Fly   535 LYLPSVGFCLLVGYGVSKLMSCNQRTRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYRSAIAI 599
            ||:||:|||:||.:|..|| |.|.|.|.:..:..:|::...:::|..||.||..|.:|:.||:.:
 Frog   381 LYVPSMGFCMLVAHGWKKL-SSNGRLRTLSWIFLALVVFTHAIKTFNRNWDWESEYTLFTSALKV 444

  Fly   600 NP--PKALGNLGSVLSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGILHQN-------------- 648
            |.  .|...|:|..|.::..||.|.:..::|...:|:....|.|:|..::|              
 Frog   445 NKNNAKLWNNVGHALENEKNYERALRFFKKATEVQPDDIGAHMNVGRTYKNLNRSKEAEESYLIA 509

  Fly   649 ----QQVYPA-------------------------------AVECFQRAIKFRPNLAVAYLNLGI 678
                .||.|.                               |.:.:::||..||:...||::.|.
 Frog   510 KALMPQVIPGKKYAARVAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 574

  Fly   679 SFIALGKRQQAIEILQAGSNLDGAAVRDRTAHDQARSSAYLQLGALYVEQGKLQRALAIYREALS 743
            ..:.:.|..:|.|.......|           |:..:..:..|..:|:|......||..:.:||.
 Frog   575 LLLKMNKPLEAREAYIKALEL-----------DRMNADLWYNLAIVYIELKDPSEALRNFNQALE 628

  Fly   744 SLPGLPQQRE--------ILYQRIGDVLGRLQQWDEAERHHRAALELQPNQVAAHLSYGITLARN 800
            ..|     |.        :|.|..|.  .||:  .||:|.....:|.:|:....:.:.|: ||.:
 Frog   629 LNP-----RHKLALFNSALLMQESGS--ARLR--PEAKRRLLTYVEEEPHDANGYFNLGM-LAMD 683

  Fly   801 SSRASEAEMWFKRALKLAPEQASVYHHYAEFLSLQSRHHESAIYHRRAAELAPNDYTLVVAAATA 865
            ..:.:|||:|.|:|::|.....|...:.|...|..||..|:...........|:....::.....
 Frog   684 EKKDTEAEVWMKKAIQLHHGFRSALFNLALLYSQTSRELEALPVLDELLRFYPDHSKGLILKGDI 748

  Fly   866 MRLLDRKVD---AEMWYRKAVALRPGDAHAHTNL 896
              |:::|.|   |:..:.|.|.:.|.:.....||
 Frog   749 --LMNQKKDIKGAKKCFEKIVEMDPNNVQGKHNL 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4341NP_608558.1 PMT_2 112..>232 CDD:304453 44/122 (36%)
DUF1736 275..343 CDD:285594 28/69 (41%)
TPR_11 602..667 CDD:290150 19/113 (17%)
TPR_1 602..634 CDD:278916 8/31 (26%)
TPR repeat 602..630 CDD:276809 8/27 (30%)
TPR repeat 635..665 CDD:276809 10/78 (13%)
TPR_11 636..700 CDD:290150 18/112 (16%)
TPR_1 636..668 CDD:278916 11/80 (14%)
TPR repeat 670..694 CDD:276809 6/23 (26%)
TPR_11 714..784 CDD:290150 18/77 (23%)
TPR repeat 715..743 CDD:276809 6/27 (22%)
TPR repeat 748..782 CDD:276809 9/41 (22%)
TPR_11 755..819 CDD:290150 20/63 (32%)
TPR repeat 787..816 CDD:276809 9/28 (32%)
TPR_11 821..887 CDD:290150 13/68 (19%)
TPR repeat 822..850 CDD:276809 6/27 (22%)
TPR repeat 855..885 CDD:276809 6/32 (19%)
TPR_11 <874..921 CDD:290150 7/26 (27%)
TPR repeat 890..918 CDD:276809 2/7 (29%)
tmtc3XP_031754762.1 DUF1736 262..326 CDD:400627 26/66 (39%)
PEP_TPR_lipo <405..>847 CDD:274350 86/399 (22%)
TPR repeat 448..478 CDD:276809 8/29 (28%)
TPR repeat 483..509 CDD:276809 4/25 (16%)
TPR repeat 533..560 CDD:276809 2/26 (8%)
TPR repeat 565..595 CDD:276809 6/29 (21%)
TPR repeat 600..628 CDD:276809 6/27 (22%)
TPR repeat 671..700 CDD:276809 9/29 (31%)
TPR repeat 705..733 CDD:276809 6/27 (22%)
TPR repeat 739..768 CDD:276809 5/30 (17%)
TPR repeat 774..797 CDD:276809 2/7 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1320023at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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