DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc2 and tmtc3

DIOPT Version :10

Sequence 1:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_031754762.1 Gene:tmtc3 / 100145573 XenbaseID:XB-GENE-5884137 Length:927 Species:Xenopus tropicalis


Alignment Length:944 Identity:245/944 - (25%)
Similarity:381/944 - (40%) Gaps:267/944 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SLAFVLYLNTLGAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLCVLSF 104
            |:.|:.|.|:|..|||:||..|||.|.|:...||.::.|.|||||||:::..||.|:|||.||:|
 Frog    17 SVIFLCYWNSLFCGFVFDDVSAILDNKDLHPSTPLKKLFQNDFWGTPMSEERSHKSYRPLTVLTF 81

  Fly   105 RLNYLIGGGFAPWGFHLVNNLLHCVATALVVRVARTLLASVWAVLAAGALFAAHPIHTEAVAGVV 169
            |||||.....|. .:|.:|.:||.|...:.::|.|..:.:..::||. .|||.||||||||.|||
 Frog    82 RLNYLFSELNAV-SYHFLNVVLHAVVCIVFLKVCRLFMDTKISLLAT-LLFAVHPIHTEAVTGVV 144

  Fly   170 GRADLAACVCYLLTYLSYLRHMRWRESGDPRQ---WLALGATLILAAAGLLCKETAITALLVCAL 231
            |||:|.:.:..|..:|||.:      |..|..   |..:...:.|.|...||||..||.:.:|.:
 Frog   145 GRAELLSSIFLLAAFLSYTK------SKGPDNSIVWTPIAVAVFLVAVATLCKEQGITVVGICCV 203

  Fly   232 FDV---------------MRGLSGQVD-----KQRLRSVCIVLGALFCMAYCRLVIVPGPQTAFS 276
            ::|               ::.|.|:..     .|.|..:.:::.:...:...|:.::......|:
 Frog   204 YEVFIAQGYTFPVLWDTTLQILMGKGSIPYSMLQTLLKLIVLMFSTLLLVVVRVQVIQSQLPVFT 268

  Fly   277 SADNP--IARTPSAWTRLLTFLYLPVFNLRLLLQPNVLSFDWGMDALPRVTSLWDRRNAQSACFY 339
            ..|||  ::.||:   |.|||.||...|..|||.|:.|..||.|..:|.:.|:.|.||..:..||
 Frog   269 RFDNPAAVSTTPA---RQLTFNYLLPVNAWLLLNPSELCCDWTMGTIPLIESILDIRNLATLLFY 330

  Fly   340 SVLVGVAWGSCRQLLSGSKEVTHCGVSSTFPQYHIQKVASRKSRSKRKRLANNTKYQAFEAAYHQ 404
            .:|                                                              
 Frog   331 FLL-------------------------------------------------------------- 333

  Fly   405 QQQEALPCRDCNNNNSSGYVYEGSSPVAQAPAQAPHLVSSAFRGSRSSSSCSNSTNSSSSSSSSS 469
                             ||                 |:..:.|.|..||.               
 Frog   334 -----------------GY-----------------LIVFSVRYSGDSSK--------------- 349

  Fly   470 SSSSSSSSSLSGGFQCSSKDYALEGMSPANRHACVLIMSLSFLALPFLPASNLLFYVGFVVAERL 534
                                              .::|:|..:.|||:|||||.|.||||||||:
 Frog   350 ----------------------------------TVLMALCLIILPFIPASNLFFPVGFVVAERV 380

  Fly   535 LYLPSVGFCLLVGYGVSKLMSCNQRTRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYRSAIAI 599
            ||:||:|||:||.:|..|| |.|.|.|.:..:..:|::...:::|..||.||..|.:|:.||:.:
 Frog   381 LYVPSMGFCMLVAHGWKKL-SSNGRLRTLSWIFLALVVFTHAIKTFNRNWDWESEYTLFTSALKV 444

  Fly   600 NP--PKALGNLGSVLSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGILHQN-------------- 648
            |.  .|...|:|..|.::..||.|.:..::|...:|:....|.|:|..::|              
 Frog   445 NKNNAKLWNNVGHALENEKNYERALRFFKKATEVQPDDIGAHMNVGRTYKNLNRSKEAEESYLIA 509

  Fly   649 ----QQVYPA-------------------------------AVECFQRAIKFRPNLAVAYLNLGI 678
                .||.|.                               |.:.:::||..||:...||::.|.
 Frog   510 KALMPQVIPGKKYAARVAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 574

  Fly   679 SFIALGKRQQAIEILQAGSNLDGAAVRDRTAHDQARSSAYLQLGALYVEQGKLQRALAIYREALS 743
            ..:.:.|..:|.|.......|           |:..:..:..|..:|:|......||..:.:||.
 Frog   575 LLLKMNKPLEAREAYIKALEL-----------DRMNADLWYNLAIVYIELKDPSEALRNFNQALE 628

  Fly   744 SLPGLPQQRE--------ILYQRIGDVLGRLQQWDEAERHHRAALELQPNQVAAHLSYGITLARN 800
            ..|     |.        :|.|..|.  .||:  .||:|.....:|.:|:....:.:.|: ||.:
 Frog   629 LNP-----RHKLALFNSALLMQESGS--ARLR--PEAKRRLLTYVEEEPHDANGYFNLGM-LAMD 683

  Fly   801 SSRASEAEMWFKRALKLAPEQASVYHHYAEFLSLQSRHHESAIYHRRAAELAPNDYTLVVAAATA 865
            ..:.:|||:|.|:|::|.....|...:.|...|..||..|:...........|:....::.....
 Frog   684 EKKDTEAEVWMKKAIQLHHGFRSALFNLALLYSQTSRELEALPVLDELLRFYPDHSKGLILKGDI 748

  Fly   866 MRLLDRKVD---AEMWYRKAVALRPGDAHAHTNL 896
              |:::|.|   |:..:.|.|.:.|.:.....||
 Frog   749 --LMNQKKDIKGAKKCFEKIVEMDPNNVQGKHNL 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468 28/74 (38%)
TPR 597..852 CDD:440225 65/313 (21%)
TPR repeat 602..630 CDD:276809 8/27 (30%)
TPR repeat 635..665 CDD:276809 10/78 (13%)
TPR repeat 670..694 CDD:276809 6/23 (26%)
TPR repeat 715..743 CDD:276809 6/27 (22%)
TPR repeat 748..782 CDD:276809 9/41 (22%)
TPR 780..>933 CDD:440225 28/120 (23%)
TPR repeat 787..816 CDD:276809 9/28 (32%)
TPR repeat 822..850 CDD:276809 6/27 (22%)
TPR repeat 855..885 CDD:276809 6/32 (19%)
TPR repeat 890..918 CDD:276809 2/7 (29%)
tmtc3XP_031754762.1 TMTC_DUF1736 261..326 CDD:462468 26/67 (39%)
TPR 442..671 CDD:440225 49/248 (20%)
TPR repeat 448..478 CDD:276809 8/29 (28%)
TPR repeat 483..509 CDD:276809 4/25 (16%)
TPR repeat 533..560 CDD:276809 2/26 (8%)
TPR repeat 565..595 CDD:276809 6/29 (21%)
LapB 569..805 CDD:442196 52/235 (22%)
TPR repeat 600..628 CDD:276809 6/27 (22%)
TPR repeat 671..700 CDD:276809 9/29 (31%)
TPR repeat 705..733 CDD:276809 6/27 (22%)
TPR repeat 739..768 CDD:276809 5/30 (17%)
TPR repeat 774..797 CDD:276809 2/7 (29%)

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