Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001030971.1 | Gene: | GLR3.4 / 839268 | AraportID: | AT1G05200 | Length: | 959 | Species: | Arabidopsis thaliana |
Alignment Length: | 1059 | Identity: | 216/1059 - (20%) |
---|---|---|---|
Similarity: | 382/1059 - (36%) | Gaps: | 298/1059 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 RSRGQQINIGAFFYDDELELEKEFMTVVNAINGPESEQTMRFYPLIKRLKPEDGSVTMQEHAC-- 81
Fly 82 --------DLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIEFDISDEGIQAEKPNH--QMTLN 136
Fly 137 LYPAQAILSKAYADIVQNFGWRKFTIVYDADDA--RAAARLQDLLQLREVHNDVVRVRKFHKDDD 199
Fly 200 FRVMWK----------SIRG--------ERRV-VLDCEPNMLVELLNSSTEFGLTGQ-YNHIFLT 244
Fly 245 NLETYTDHLEELAADNETFAVNITAAR------------------LLVNPDPPPYSLPYGY---- 287
Fly 288 ---------VTQRDNIVYESSDPPRTLIHDLIHDALQLFAQSWRNASFFYPDRMVVPRITCDFAA 343
Fly 344 SGGRTWAMGRYLARLMKGTSGVNNTNFRTSILQFDEDGQRITFNIEVYDPLDGIG---IAIWDPR 405
Fly 406 GQITQLNVDV------------KAQKKMIY----------------RVATRIGPP----YFSYNE 438
Fly 439 TARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQWNGIIGEIINNDAH 503
Fly 504 MGICDLTITQARKTAVDFTVPFMQLGVSIL-----AYKSPHVEKTLDAYLAPFGGEVW------- 556
Fly 557 ------IWILISVFVMTFLKTIVARISKMDWENPHPCNRDP---EVLENQWRIHNTGWL-----T 607
Fly 608 VASIMTAGCDILPRSPQVRMFEATWWIFAIIIAN-SYTANLAAFLTSSKMEGSIANLKDLSAQKK 671
Fly 672 ---VKFGTI---YGGSTYNLLAD-----SNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRG 725
Fly 726 DYMFLMETTTLEYHREQNCDLRSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQ 790
Fly 791 KWWKNPNASCFEEPDPDATPDMTFEELRGIFYTLYAGILIAFLIGITEFL---VYVQQVALE-ER 851
Fly 852 LTFKDAFKKEIRFVLCVWNNRKPIVAGTPISSVRTTPRRSLDKSLDRTPKSSRRVVIGRSSEEMR 916
Fly 917 EMAQGSGSSSGSNNAGRGE 935 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 89/445 (20%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 16/96 (17%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 96/428 (22%) | ||
Lig_chan | 554..828 | CDD:278489 | 65/306 (21%) | ||
GLR3.4 | NP_001030971.1 | PBP1_GABAb_receptor_plant | 62..450 | CDD:380645 | 89/452 (20%) |
Periplasmic_Binding_Protein_Type_2 | <518..591 | CDD:389745 | 20/76 (26%) | ||
Lig_chan | 615..869 | CDD:365843 | 67/316 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 82 | 0.746 | Domainoid score | I2907 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.020 |