Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001320141.1 | Gene: | GLUR2 / 829682 | AraportID: | AT4G35290 | Length: | 912 | Species: | Arabidopsis thaliana |
Alignment Length: | 946 | Identity: | 193/946 - (20%) |
---|---|---|---|
Similarity: | 339/946 - (35%) | Gaps: | 257/946 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 RGQQINIGAFFYDDELELEKEFMTVVNAINGPESEQTMRFYPLI---KRLK------PEDGSVTM 76
Fly 77 QEHACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIEFDISDEGIQA-EKPNHQMTLNLYPA 140
Fly 141 QAILSKAYADIVQNFGWRKFTIVYDADD---------------ARAAARLQDLLQL-------RE 183
Fly 184 VHNDVVRVRKFHKDDDFRVMWKSIRGERRVVLDCEPNMLVELLNSSTEFGLTGQ-YNHIFLTNLE 247
Fly 248 TYTDHLEELAA--------------------------------DNETFAVNITAARLLVNPDPPP 280
Fly 281 YSLPYGYVTQRDNIVYESSDPPRTLIHDLIHDALQLFAQSWRNASFFYPDRMVVPRITCDFAASG 345
Fly 346 GRTWAMGRYLARLMKGTSGVN---NTNFR--TSILQFDEDGQRITFNIEVYDPLDG--------- 396
Fly 397 --IGIAIWDPRGQITQLNVDVKAQKKMIYRVA--------------------TRIG-PPYFSYNE 438
Fly 439 TARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQWNGIIGEIINN--- 500
Fly 501 ---DAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLD---AYLAPFGGEVWIWI 559
Fly 560 LISVFVMTFLKTIVARISKMDWENPHPCN---RDP---EVLENQWRIHNTGWLT--VASIMTAGC 616
Fly 617 DILPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDL-SAQKKVKFGTIYGG 680
Fly 681 STYNLLADSNETVYRLAFNLMNN-----DDPSAYTKDNLEGVDRVRKNRGDY--MFLMETTTLEY 738
Fly 739 HREQNCDLRSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQKWWKNPNASCFEE 803
Fly 804 PDPDATPDMTFEELR-----GIFYTLYAGILIAFLI 834 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 83/458 (18%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 19/83 (23%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 97/416 (23%) | ||
Lig_chan | 554..828 | CDD:278489 | 61/294 (21%) | ||
GLUR2 | NP_001320141.1 | PBP1_GABAb_receptor_plant | 31..422 | CDD:380645 | 82/454 (18%) |
GluR_Plant | 466..804 | CDD:270404 | 95/393 (24%) | ||
Lig_chan | 590..840 | CDD:395014 | 61/293 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 82 | 0.746 | Domainoid score | I2907 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.020 |