Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001326369.1 | Gene: | GLR3.6 / 824311 | AraportID: | AT3G51480 | Length: | 903 | Species: | Arabidopsis thaliana |
Alignment Length: | 894 | Identity: | 189/894 - (21%) |
---|---|---|---|
Similarity: | 330/894 - (36%) | Gaps: | 203/894 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 WQRILLLGC----MWSAFFMCRSRGQQINIGAFFYDDEL--ELEKEFMTV----VNAINGPESEQ 56
Fly 57 TMRFYPLIKRLKPEDGSVTMQEHACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIEFDISD 121
Fly 122 EGIQ----------AEKPNHQMTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADD--ARAAAR 174
Fly 175 LQDLLQLREVHNDVVRVRKFHK---------DDDFRVMWKSIRGERRVVLDCEPNML--VELLNS 228
Fly 229 STEFGL--TGQYNHIFLTNLETYTDHLEELAADNETFAVNITAARLLVNPDPPPYSLPYGYVTQR 291
Fly 292 DNIVYESSDPPRTLIHDLIHDALQLFAQSWRN---------ASFFYPDRMVVPRITCDFAASGGR 347
Fly 348 -TWAMGRYLARLMKGTSGVNNTN-------FRTSILQFDEDG--QRITFNIE------VYDPLDG 396
Fly 397 IG-----IAIWDPRGQITQL------NVDVKAQKKMIYRVA--------------------TRIG 430
Fly 431 -PPYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQWNGII 494
Fly 495 GEIINNDAH-MGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEK---TLDAYLAPFGGEV 555
Fly 556 WIWILISVFVMTFLKTIVARISKMDWENPHPCN---RDP---EVLENQWRIHNTGWLTVASIMTA 614
Fly 615 GCDILPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQKKVKFGTIYG 679
Fly 680 GSTYN-LLADSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEYHREQN 743
Fly 744 CDLRSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQKW 792 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 93/438 (21%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 17/93 (18%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 88/402 (22%) | ||
Lig_chan | 554..828 | CDD:278489 | 54/246 (22%) | ||
GLR3.6 | NP_001326369.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 82 | 0.746 | Domainoid score | I2907 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.020 |