Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_180048.1 | Gene: | GLR2.2 / 817008 | AraportID: | AT2G24720 | Length: | 920 | Species: | Arabidopsis thaliana |
Alignment Length: | 984 | Identity: | 203/984 - (20%) |
---|---|---|---|
Similarity: | 353/984 - (35%) | Gaps: | 308/984 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 FFMC--RSRGQ-----QINIG---------------------AFFYDDELELEKEFMT--VVNAI 49
Fly 50 NGPESEQTMRFYPLIKRLKPEDGSVTMQEHACDLIDN-GVAAIFGPSSKAASDIVALVCNSTGIP 113
Fly 114 HIEFDISDEGIQAEKPNHQMTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDARAAA---RL 175
Fly 176 QDLLQLREVHNDVVRVRKFHKDDDFRVMWKSIRGERRVVLDC-EPNMLVELLNSSTEFGLTGQYN 239
Fly 240 HIFLTNLETYTDHLEELAADNETFAVNITAARL-LVNPDPPPYSLPYGYVTQRDNIVYESSDPPR 303
Fly 304 TL-------------IHDLIHDA--LQLFAQSWRNASFFYPDRMVVPRITCDFAASGGRTWAMGR 353
Fly 354 YLARLMK-GTSGVNNTNFRTSILQFDEDGQRITFNIEVYDPLDGIGIAIWDPR------------ 405
Fly 406 ---------GQI---------------------TQLNVDVK---AQKKMIYRVAT---------- 427
Fly 428 --------------------RIGPP----YFSYNETARELNLTGNALYQGYAVDLIDAIARHVGF 468
Fly 469 E--YVFVPVADQQYGKLDKETKQWNGIIGEIINN------DAHMGICDLTITQARKTAVDFTVPF 525
Fly 526 MQLGVSILAYKSPHVEKTLDAYLAPFGGEVWIWILISVFVMTFLKTIVARISKMDWENPHPCNRD 590
Fly 591 PEVLENQWRIHNTGWLTVASIMTAGCDILPR----SPQVRMFEATWWIFAIIIANSYTANLAAFL 651
Fly 652 TSSKMEGSIANLKDLSAQKKVKFGTIYGGSTYN------LLADSNETVYRLAFNLMNNDDPSAYT 710
Fly 711 KDNLEGVDRV----RKNRGDYMFLMETTTLEYHREQNCD-LRSVGEKFGEKHYAIAVPFGAEYRS 770
Fly 771 NLSVAILKLSERGELYDLKQKWWKNPNASCFEEPD----PDATPDMTFEELR-GIFYTLYAGILI 830
Fly 831 AFLIGITEF 839 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 82/422 (19%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 17/99 (17%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 91/427 (21%) | ||
Lig_chan | 554..828 | CDD:278489 | 70/293 (24%) | ||
GLR2.2 | NP_180048.1 | PBP1_GABAb_receptor | 33..412 | CDD:107361 | 89/478 (19%) |
ANF_receptor | 47..392 | CDD:279440 | 82/444 (18%) | ||
HisJ | 438..>587 | CDD:223904 | 35/159 (22%) | ||
GluR_Plant | 452..801 | CDD:270404 | 89/394 (23%) | ||
Lig_chan | 582..819 | CDD:278489 | 64/274 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 82 | 0.746 | Domainoid score | I2907 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 137 | 1.000 | Inparanoid score | I1813 |
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.070 |