Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009303592.1 | Gene: | grik1a / 798001 | ZFINID: | ZDB-GENE-030131-6502 | Length: | 919 | Species: | Danio rerio |
Alignment Length: | 900 | Identity: | 268/900 - (29%) |
---|---|---|---|
Similarity: | 449/900 - (49%) | Gaps: | 117/900 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 FFMCRSRGQQINIGAFFYDDELEL----EKEFMTVVNAINGPES--EQTMRFYPLIKRLKPEDGS 73
Fly 74 VTMQEHACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIEFDISDEGIQAEKPNHQMTLNLY 138
Fly 139 PAQAILSKAYADIVQNFGWRKFTIVYDADDARAAARLQDLLQLREVHNDVVRVRKFHK-DDDFRV 202
Fly 203 MWKSIRGERR--VVLDCEPNMLVELLNSSTEFGLTGQYNHIFLTNLETYTDHLEELAADNETF-- 263
Fly 264 -AVNITAARLLVNPDPPPYSLPYGYVTQRDNIVYESS-----DPPR----------TLIHDLIHD 312
Fly 313 ALQLFAQSWRNASFFYPDRMVVPRITCDFAASGGRTWAMGRYLARLMK-----GTSG---VNNTN 369
Fly 370 -----FRTSILQFDEDG--QRITFNIEVYDPLDGIG--------IAIWDPRGQITQLNV-DVKAQ 418
Fly 419 KKMIYRVATR-------IGPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVA 476
Fly 477 DQQYGKLDKETKQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPH-V 540
Fly 541 EKTLDAYLAPFGGEVWIWILISVFVMTFLKTIVARISKMDWENPHPCNRDPEVLENQWRIHNTGW 605
Fly 606 LTVASIMTAGCDILPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQK 670
Fly 671 KVKFGTIYGGSTYNLLADSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTT 735
Fly 736 LEYHREQNCDLRSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQKWWKNPNASC 800
Fly 801 FEEPDPDATPDMTFEELRGIFYTLYAGILIAFLIGITEFLVYVQQVA-LEERLTF 854 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 112/427 (26%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 20/103 (19%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 129/378 (34%) | ||
Lig_chan | 554..828 | CDD:278489 | 96/273 (35%) | ||
grik1a | XP_009303592.1 | Periplasmic_Binding_Protein_Type_1 | 37..432 | CDD:299141 | 117/440 (27%) |
ANF_receptor | 57..398 | CDD:279440 | 99/374 (26%) | ||
Periplasmic_Binding_Protein_Type_2 | 446..815 | CDD:304360 | 128/374 (34%) | ||
Lig_chan | 577..846 | CDD:278489 | 96/273 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591029 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 1 | 1.010 | - | - | D60688at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.860 |