Protein Alignment GluRIIC and Ir7d

DIOPT Version :9

• Sequence 1: NP_608557.4
• Gene: GluRIIC / 33275
• FlyBaseID: FBgn0046113
• Length: 940
• Species: Drosophila melanogaster
• Sequence 2: NP_001138175.1
• Gene: Ir7d / 7354416
• FlyBaseID: FBgn0259190
• Length: 594
• Species: Drosophila melanogaster
• Alignment Length: 645
• Identity: 117/645 - (18%)
• Similarity: 202/645 - (31%)
• Gaps: 228/645 - (35%)

  Fly   252 HL--EELAADNETFAVNITAARLLVNPDPPPYSLPYGYVTQRDNIV----YESSDPPRTLIHDLI 310
            ||  |:||:.     ::.|..::.:|          |.......:.    ||..|..|.:   |:
  Fly    25 HLLEEQLASQ-----ISATLQKIFIN----------GLAVYNFGVFISTSYEEMDRDRVI---LV 71

  Fly   311 HDALQLFAQSWRNASFFYPDRMVVP---------RITCD------FAASGGRTWAMGRYLARLMK 360
            |..|.      ||   .||....|.         :||..      |..:..:..|:
  Fly    72 HQVLN------RN---LYPPNFPVAVVLASKMNRKITAQVFTQLLFVQNAEQAIAI--------- 118

  Fly   361 GTSGVNNTNFRTSILQFDEDGQRI----------------------------TFNIEVYDP---- 393
             ..|||.......:|...:..:.|                            .||:..|.|
  Fly   119 -AEGVNRNGLCVIVLLTSQPERPIMTKIFTYFMQERYNINVVILVPRLHGVQAFNVRPYTPTSCS 182

  Fly   394 -LDGIGIAI-----WD--PRGQITQLNVDVKAQKKMIYRVATRIGPPYFSYNETARELNLTGNAL 450
             |:.:.|.|     ||  ||   ...|:.......:::.:     |||...|..:.: .:.|
  Fly   183 SLEPVEIDIKDGDLWDVFPR---RLKNLHGCPLSVIVWDI-----PPYMRINWKSSD-PMDG--- 235

  Fly   451 YQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQWNGII-GEIINNDAHMGI-------- 506
            ..|....|:..:||.:.|....:|             .:.||:| |....|....|.
  Fly   236 LDGLDGLLLRIVARKMNFTLKLIP-------------NEPNGLIGGSSFMNGTFTGAYKMLRERR 287

  Fly   507 CDLTI-----TQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAYLAPFGGEVWIWILISVFVM 566
            .::||     |..|.|.::.|.|:.|:.. |:..::.......:..|.||  |.:.|:|:|
  Fly   288 ANITIGCAACTPERSTFLEATSPYSQMSY-IIVLQARGGYSIYEVMLFPF--EKYTWLLLS---- 345

  Fly   567 TFLKTIVARISKMDWENPHPCNRDPEVLENQWRIHN---TGWLTVASIMTAGCDILPRSPQVRMF 628
                ||:.    :.|           ::.::||:.:   .||:.
  Fly   346 ----TILG----LHW-----------IVGSRWRMPSPILAGWML--------------------- 370

  Fly   629 EATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQKKVKFGTIYGGSTYNLLADSNETV 693
                |||  :|..||.|::..|:.:|.::.|...|..          .:.||  :..:.|  ...
  Fly   371 ----WIF--VIRASYEASVFNFIQNSPVKPSPRTLDQ----------ALSGG--FRFITD--HAS 415

  Fly   694 YRLAFNLMNNDDPSAYTK---------DNLEGVDRVRKNRGDY---MFLMETTTLEYHREQNCDL 746
            ||:...:     ||...|         |..:.:.:.....|.:   .||.:  .|..||:....|
  Fly   416 YRMTLKI-----PSFQGKTLISAGQPVDVFDALLKAPWKTGAFTSRAFLAD--HLVRHRKHRNQL 473

  Fly   747 RSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQ--KWWKNPNASCFEEP 804
            ..:.||..:....:..|.|:.:...::..:..:...|......|  .|...|..:..:.|
  Fly   474 VILAEKIVDNMLCMYFPHGSYFAWEINKLLFNMRSFGIFQHHSQILAWDNLPTTTDTDTP 533

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluRIIC	NP_608557.4	PBP1_iGluR_Kainate	26..404	CDD:107377	38/212 (18%)
		Periplasmic_Binding_Protein_Type_1	<279..363	CDD:299141	17/102 (17%)
		PBP2_iGluR_Kainate	423..794	CDD:270432	74/401 (18%)
		Lig_chan	554..828	CDD:278489	47/268 (18%)
Ir7d	NP_001138175.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45462669
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930