Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001121809.1 | Gene: | grin2bb / 559976 | ZFINID: | ZDB-GENE-061207-27 | Length: | 1770 | Species: | Danio rerio |
Alignment Length: | 972 | Identity: | 214/972 - (22%) |
---|---|---|---|
Similarity: | 370/972 - (38%) | Gaps: | 223/972 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 67 LKPEDGSVTMQEHACDLIDNGVAA----------IFGPSS--KAASDIVALVCNSTGIPHIEFDI 119
Fly 120 SDEGIQAEKPNHQMTLNLYPAQAILSKAYADIVQNFGWRKFTIV---YDADDARAAARLQDLLQL 181
Fly 182 REVHNDVVRVRKFHKDDDFRVMWK----------------SIRGERR------VVLDCEPNMLVE 224
Fly 225 LLNSSTEFGLTGQYNHIFLTNLETYTDHLEELAADNETFAVNITAARLL-VNPDPPPYSLPYGYV 288
Fly 289 TQRDNIVYES--------SDPPRTLIHDLIHDALQLFAQSWRNASFFYPDRMVVPRITCDFAASG 345
Fly 346 GRTWAMGRYLARLMKGTSGVNNTNFRTSILQFDEDGQR-------ITFNIE-VYDPLD------- 395
Fly 396 GIGIAIWDPRGQITQLNVDVKAQKKMIYRVATRIGPPYFSYNET--------------AREL--- 443
Fly 444 NLTGNA-LY-----QGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQWNGIIGEIINNDA 502
Fly 503 HMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAYLAPFGGEVWIWILISVFVMT 567
Fly 568 FLKTIVARISKMDWENPHPCNR----DPEVLENQWRIHNTGWLTVASIMTAGCDIL-PRSPQVRM 627
Fly 628 FEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQ------KKVKFGTIYGGSTYNLL 686
Fly 687 ADSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEY--HREQNCDLRSV 749
Fly 750 GEK--FGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQKWWKNPNASCFEEPDPDATPDM 812
Fly 813 TFEELRGIFYTLYAGILIAFLIGITEFLVYVQQVALEERLTFKDAFKKEIRFVLCVWNNRKP--- 874
Fly 875 ---------IVAGTPI---SSVRTTPRRSLDKSLDRTPKSSRRVVIGRSSEEMREMAQGSGS 924 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 78/397 (20%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 15/91 (16%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 106/408 (26%) | ||
Lig_chan | 554..828 | CDD:278489 | 70/288 (24%) | ||
grin2bb | NP_001121809.1 | PBP1_iGluR_NMDA_NR2 | 107..470 | CDD:107373 | 78/398 (20%) |
ANF_receptor | 138..442 | CDD:279440 | 73/369 (20%) | ||
PBP2_iGluR_NMDA_Nr2 | 482..882 | CDD:270436 | 107/419 (26%) | ||
Lig_chan | 636..908 | CDD:278489 | 70/288 (24%) | ||
NMDAR2_C | 919..1770 | CDD:287527 | 17/101 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591000 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |