Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_113796.1 | Gene: | Gria1 / 50592 | RGDID: | 621531 | Length: | 907 | Species: | Rattus norvegicus |
Alignment Length: | 957 | Identity: | 265/957 - (27%) |
---|---|---|---|
Similarity: | 428/957 - (44%) | Gaps: | 122/957 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 LGCMWSAFFMCRSRGQQINIGAFFYDDELELEKEFMTVVNAINGPESEQTMRFYPLIKRLKPEDG 72
Fly 73 SVTMQEHACDLIDNGVAAIFGPSSKAASDIVALVCNSTGI----PHIEFDISDEGIQAEKPNHQM 133
Fly 134 TLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDARAAARLQDLLQLREVHN-DVVRVRKF-HK 196
Fly 197 DDDFRVMWKSI--RGERRVVLDCEPNMLVELLNSSTEFGLTGQYNHIFLTNLETYTDHLEELAAD 259
Fly 260 NETFAVNITAARLLVNPDPPPYSLPYGYVT--QRDNIVYESSDPPRTLIHDLIHDALQLFAQSWR 322
Fly 323 NASFFYPDRMVVPR--ITCDFAASGGRTWAMGRYLARLMKGTSGVNNTNFR--TSILQFDEDGQR 383
Fly 384 ITFNIEVYD-PLDGI-GIAIWD------PRGQITQLNVDVKAQKKMIYRVATRIGPPYFSYNETA 440
Fly 441 RELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQWNGIIGEIINNDAHMG 505
Fly 506 ICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAYLAPFGGEVWIWIL---ISVFVMT 567
Fly 568 FLKTIVARISKMDWENPH-PCNRDPEVLE--NQWRIHNTGWLTVASIMTAGCDILPRSPQVRMFE 629
Fly 630 ATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQKKVKFGTIYGGSTYNLLADSNETVY 694
Fly 695 RLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEY-HREQNCDLRSVGEKFGEKHY 758
Fly 759 AIAVPFGAEYRSNLSVAILKLSERGELYDLKQKWWKNPNASCFE--EPDPDATPDMTFEELRGIF 821
Fly 822 YTLYAGILIAFLIGITEFLVYVQQVALEERLTFKDAFKKEIRFVLCVWNNRKPIVAGTPISSVRT 886
Fly 887 TPRRSLDKSLDRTPKSSRRVVIGRSSEEMREMAQGSGSSSGSNNAGR 933 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 90/399 (23%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 16/87 (18%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 142/377 (38%) | ||
Lig_chan | 554..828 | CDD:278489 | 101/282 (36%) | ||
Gria1 | NP_113796.1 | PBP1_iGluR_AMPA_GluR1 | 26..392 | CDD:380613 | 91/401 (23%) |
PBP2_iGluR_AMPA_GluR1 | 406..787 | CDD:270447 | 143/386 (37%) | ||
Glutamate binding. /evidence=ECO:0000250 | 492..494 | 0/1 (0%) |