Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001004123.1 | Gene: | grid2 / 448841 | ZFINID: | ZDB-GENE-040913-1 | Length: | 1009 | Species: | Danio rerio |
Alignment Length: | 957 | Identity: | 237/957 - (24%) |
---|---|---|---|
Similarity: | 413/957 - (43%) | Gaps: | 154/957 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 ILLLGCMWSAFFMCRSRGQQINIGAFFYDDELELEKEFMTVVNAIN-GPESEQTMRFYPLIKRLK 68
Fly 69 PEDGSVTMQ--EHACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIEFDISDEG-------- 123
Fly 124 -IQAEKPNHQMTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDAD-DARAAARLQDL-------L 179
Fly 180 QLREVHNDV----------VRVRKFHKDDDFRVMWKSIRGERRVVLDCEPNMLVELLNSSTEFGL 234
Fly 235 TGQYNHIFLTNLETYTDHLEELAADNETFAVNITAARLLVNPDPPPYSLPYGYVTQRDNIVYESS 299
Fly 300 DP--PRTLIHDL----IHDALQLFAQSWRNASFFYPDRMVVPRITCDFAASGGRTWAMGRYLARL 358
Fly 359 MK--GTSGVNNTNFRTSILQFDEDGQRITFNIEV----YDPLDGIGI---AIWDPRGQITQLNVD 414
Fly 415 VKAQKKM---IYRVATRIGPPYFSYNETARELNLTGN-ALYQGYAVDLIDAIARHVGFEYVFVPV 475
Fly 476 ADQQYGKLDKETKQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHV 540
Fly 541 EKTLD--AYLAPFGGEVWIWILISVFVMTFLKTIVARISKMDWENPHPCNRDPEVLENQWRIHNT 603
Fly 604 GWLTVASIMTAGCDILPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSA 668
Fly 669 QKKVKFGTIYGGSTYNLLAD------SNETVYRLAFNLMNNDDPSA-YTKDNLEGVDRVRKNRGD 726
Fly 727 YMFLMETTTLEY--HREQNCDLRSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLK 789
Fly 790 QKWWKNPNASCFEEPDPDAT----PDMTFEELRGIFYTLYAGILIAFLIGITEFLVYVQQVALEE 850
Fly 851 RLTFKDAFKKEIRFVLCVWNNRKPIVAGTPISSVRTTPRRSLDKSLD 897 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 87/422 (21%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 17/91 (19%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 118/382 (31%) | ||
Lig_chan | 554..828 | CDD:278489 | 78/286 (27%) | ||
grid2 | NP_001004123.1 | PBP1_iGluR_delta_2 | 28..427 | CDD:107386 | 89/428 (21%) |
ANF_receptor | 42..404 | CDD:279440 | 78/391 (20%) | ||
PBP2_iGluR_delta_2 | 440..806 | CDD:270449 | 119/387 (31%) | ||
Lig_chan | 568..841 | CDD:278489 | 77/285 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 989..1009 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591021 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |