Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261621.2 | Gene: | GluRIB / 44484 | FlyBaseID: | FBgn0264000 | Length: | 1182 | Species: | Drosophila melanogaster |
Alignment Length: | 1018 | Identity: | 241/1018 - (23%) |
---|---|---|---|
Similarity: | 421/1018 - (41%) | Gaps: | 228/1018 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 LLLGCMWSAF--FMCRSRG----------------QQINIGAFFYDDELELEKEFMTVVNAINGP 52
Fly 53 ESEQTMRFYPLIKRLKPEDGSVTMQEHACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIEF 117
Fly 118 DISDEGIQAEKPNHQMTLNLYP--AQAILSKAYADIVQNFGWRKFTIVYDADDARAAARLQDLLQ 180
Fly 181 LREVHND------VVRVRKFHKDDDFRVMWKSI-RGE-RRVVLDCEPNMLVELLNSSTEFGLTGQ 237
Fly 238 YNHIFLTNLETYTDH--LEELAADN-------ETFAVNITAARL------LVNPD-------PPP 280
Fly 281 YSLPYGYVTQRDNIVYESSDPPRTLIHDLIHDALQLFAQSWRNASFFYPDR-----------MVV 334
Fly 335 PRITC-------DFAASGG------------------------------------RTWAMG---- 352
Fly 353 RYLARL-MKGTSGVNNTNFRTSILQFDEDGQRITFNIEVYDPLDG---IGIAIWDPRGQITQLNV 413
Fly 414 -------DVKAQKKMIYRVATRIGPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYV 471
Fly 472 FVPVADQQYGKLDKETKQ--WNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILA 534
Fly 535 YKSPHVEKTLDAYLAPFGGEVWIWILISVFVMTFLKTIVARISKMDW----------ENPHP--- 586
Fly 587 ----CNRDP--------------------------------------------EVLENQWRIHNT 603
Fly 604 GWLTVASIMTAGCDILPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSA 668
Fly 669 QKKVKFGTIYGGSTYNLLADSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMET 733
Fly 734 TTLEY-HREQNCDLRSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQKWWKNPN 797
Fly 798 ASCFEEPDPDAT-PDMTFEELRGIFYTLYAGILIAFLIGITEF 839 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 91/471 (19%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 21/142 (15%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 125/434 (29%) | ||
Lig_chan | 554..828 | CDD:278489 | 91/336 (27%) | ||
GluRIB | NP_001261621.2 | PBP1_iGluR_AMPA | 43..478 | CDD:107375 | 91/475 (19%) |
ANF_receptor | 55..461 | CDD:279440 | 85/446 (19%) | ||
PBP2_iGluR_AMPA | 497..938 | CDD:270433 | 127/443 (29%) | ||
Lig_chan | 632..967 | CDD:278489 | 91/336 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45462511 | |
Domainoid | 1 | 1.000 | 82 | 0.746 | Domainoid score | I2907 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.940 |