Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_649720.2 | Gene: | Ir84a / 40891 | FlyBaseID: | FBgn0037501 | Length: | 644 | Species: | Drosophila melanogaster |
Alignment Length: | 449 | Identity: | 83/449 - (18%) |
---|---|---|---|
Similarity: | 168/449 - (37%) | Gaps: | 90/449 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 431 PP------YFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQ 489
Fly 490 WNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAYLAPFGGE 554
Fly 555 VWIWILISVFVMTFLKTIVARISKMDWENPHPCNRDPEVLENQWRIHNTGWLTVAS--IMTAGCD 617
Fly 618 ILPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQKKVKFGTIYGGST 682
Fly 683 YNLLADSNETV--------YRLAFNLMNNDDPSAYTK-------DNL----EGVDRVRKNR---- 724
Fly 725 ----GDYMFLMETTTLEYHREQNCDLRSVGEKFGEKHYAIAV-PFGAEYRSNLSVAILKLSERGE 784
Fly 785 LYDLKQKWW-KNPNASCFEEPDPDATPDMTFEELRGIFYTLYAGILIAFLIGITEFLVY 842 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | |||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 76/399 (19%) | ||
Lig_chan | 554..828 | CDD:278489 | 60/304 (20%) | ||
Ir84a | NP_649720.2 | nt_trans | <54..>112 | CDD:294020 | |
Periplasmic_Binding_Protein_Type_2 | 222..583 | CDD:304360 | 74/396 (19%) | ||
Lig_chan | 355..602 | CDD:278489 | 58/290 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45462625 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |