Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_999971.1 | Gene: | gria4a / 407735 | ZFINID: | ZDB-GENE-020125-7 | Length: | 898 | Species: | Danio rerio |
Alignment Length: | 904 | Identity: | 253/904 - (27%) |
---|---|---|---|
Similarity: | 418/904 - (46%) | Gaps: | 96/904 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 ILLLGCMW----SAFFMCRSRGQQINIGAFFYDDELELEKEFMTVVNAI----NGPE-SEQTMRF 60
Fly 61 YPLIKRLKPEDGSVTMQEHACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIEFDISDEGIQ 125
Fly 126 AEKPNHQMTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDARAAARLQDLLQLREVHN---D 187
Fly 188 VVRVRKFHKDDDFRVMWKSI--RGERRVVLDCEPNMLVELLNSSTEFGLTGQYNHIFLTNLETYT 250
Fly 251 DHLEELAADNETFAVNITAARLLVNPDPPPYSL--PYGYVTQRDNIVYESSDPPRTLIHDLIHDA 313
Fly 314 LQLFAQSWRNASFFYPDRMVVPR--ITCDFAASGGRTWAMGRYLARLMKGT--SGVNNTNFRTSI 374
Fly 375 LQFDEDGQRITFNIEVYDPLDGIG---IAIWDPRGQITQLNVDV-----KAQKKMIYRVATRIGP 431
Fly 432 PYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQWNGIIGE 496
Fly 497 IINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAYLAPFGGEVWIWIL- 560
Fly 561 --ISVFVMTFLKTIVARISKMDW--ENPH------PCNRDPEVLENQWRIHNTGWLTVASIMTAG 615
Fly 616 CDILPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQKKVKFGTIYGG 680
Fly 681 STYNLLADSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEYHREQN-C 744
Fly 745 DLRSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQKWWKN-----PNASCFEEP 804
Fly 805 DPDATPDMTFEELRGIFYTLYAGILIAFLIGITEFLVYVQQVALEERLTFKDAFKKEIR 863 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 87/396 (22%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 18/89 (20%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 142/382 (37%) | ||
Lig_chan | 554..828 | CDD:278489 | 105/290 (36%) | ||
gria4a | NP_999971.1 | PBP1_iGluR_AMPA_GluR4 | 23..393 | CDD:107383 | 87/402 (22%) |
ANF_receptor | 34..375 | CDD:279440 | 80/370 (22%) | ||
PBP2_iGluR_AMPA_GluR4 | 408..790 | CDD:270445 | 143/390 (37%) | ||
Lig_chan | 540..821 | CDD:278489 | 105/290 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591045 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.950 |