Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_991293.1 | Gene: | gria1b / 403044 | ZFINID: | ZDB-GENE-020125-2 | Length: | 917 | Species: | Danio rerio |
Alignment Length: | 1018 | Identity: | 273/1018 - (26%) |
---|---|---|---|
Similarity: | 423/1018 - (41%) | Gaps: | 188/1018 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MWQRILLLGCMWSAFFMCRSRGQQINIGAFFYDDELELEKEFMTVVNAINGPESEQTMRFYPLIK 65
Fly 66 RLKPE------DGSVTMQEHACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIEFDISDEGI 124
Fly 125 QAEKPNHQMTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDARAAARLQDLL--------QL 181
Fly 182 REVHNDVVRVRKFHKDDDFRVMWKSIRGERRVVLDCEPNMLVELLNSSTEFGLTGQYNHIFLTNL 246
Fly 247 ETYTDHLEELAADNETFAVNITAARLLVNPDPPPYSLPYGYVTQRDNIVYESSD---PPRTLIHD 308
Fly 309 --LIHDALQLFAQSWRNASFFYPDRMVVPRITCDFAASGGR-------TWAMGRYLARLMKGTSG 364
Fly 365 VNNTNFR--TSILQFDEDGQRITFNIEV--YDPLDGIGIAIWDPRGQI-------TQLNVDVKAQ 418
Fly 419 KKMIYRVATRIGPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKL 483
Fly 484 DKETKQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAYL 548
Fly 549 APFGGEVWIWIL---ISVFVMTFLKTIVARISKMDWE-----------------NPHPCNRDPEV 593
Fly 594 LENQ--------------WRIHNTGWLTVASIMTAGCDILPRSPQVRMFEATWWIFAIIIANSYT 644
Fly 645 ANLAAFLTSSKMEGSIANLKDLSAQKKVKFGTIYGGSTYNLLADSNETVYRLAFNLMNNDDPSAY 709
Fly 710 TKDNLEGVDRVRKNRGDYMFLMETTTLEY-HREQNCDLRSVGEKFGEKHYAIAVPFGAEYRSNLS 773
Fly 774 VAILKLSERGELYDLKQKWWKNPNASCFE--EPDPDATPDMTFEELRGIFYTLYAGILIAFLIGI 836
Fly 837 TEFLVYVQQVALEERLTFKDAFKKEIRFVLCVWNNRKPIVAGTPISSVRTTPRRSLDKSLDRTPK 901
Fly 902 SSRRVVIGRSSEEMREMA------------QGSGSSSGSNNAG 932 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 88/407 (22%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 19/95 (20%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 146/405 (36%) | ||
Lig_chan | 554..828 | CDD:278489 | 105/310 (34%) | ||
gria1b | NP_991293.1 | PBP1_iGluR_AMPA_GluR1 | 26..387 | CDD:107385 | 89/412 (22%) |
ANF_receptor | 41..368 | CDD:279440 | 80/377 (21%) | ||
PBP2_iGluR_AMPA_GluR1 | 404..812 | CDD:270447 | 147/415 (35%) | ||
Lig_chan | 536..842 | CDD:278489 | 105/310 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591017 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.950 |