Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_648548.1 | Gene: | Ir68b / 39378 | FlyBaseID: | FBgn0036250 | Length: | 635 | Species: | Drosophila melanogaster |
Alignment Length: | 446 | Identity: | 86/446 - (19%) |
---|---|---|---|
Similarity: | 150/446 - (33%) | Gaps: | 114/446 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 453 GYAVDLIDAIARHVGFE-------YVFVPVADQQYGKLDKETKQWNGIIGEIINNDAHMGICDLT 510
Fly 511 ITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAYLAPFGGEVWIWILISVFVMTFLKTIVAR 575
Fly 576 ISKMDWENPHPCNRDP------------EVLENQWRIH---NTGWLTVASIMTAGCDILPRSPQV 625
Fly 626 RMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQKKVKFGT-IYGGSTYNLLADS 689
Fly 690 NETVYRLAFNLMNNDD---PSAYTKDNLEGVDRVRKNRGDYM--------FLMET---------- 733
Fly 734 -TTLEYHREQNCDLRSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERG-----ELYDLKQKW 792
Fly 793 WKNPNASCF-----EEPDPDATPD----------MTFEELRGIFYTLYAGILIAFL 833 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | |||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 72/390 (18%) | ||
Lig_chan | 554..828 | CDD:278489 | 62/331 (19%) | ||
Ir68b | NP_648548.1 | Lig_chan | 333..607 | CDD:278489 | 60/317 (19%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45462701 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |