Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001106213.1 | Gene: | Gria3 / 29628 | RGDID: | 70958 | Length: | 888 | Species: | Rattus norvegicus |
Alignment Length: | 867 | Identity: | 259/867 - (29%) |
---|---|---|---|
Similarity: | 410/867 - (47%) | Gaps: | 65/867 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 INIGAFFYDDELELEKEFMTVVNAINGPE--SEQTMRFYPLIKRLKPEDGSVTMQEHACDLIDNG 87
Fly 88 VAAIFGPSSKAASDIVALVCNSTGIPHIEFDISDEGIQAEKPNHQMTLNLYPAQAILSKAYADIV 152
Fly 153 QNFGWRKFTIVYDADDARAAARLQDLLQLREVHNDVVRVRKFH--KD-DDFRVMWKSI--RGERR 212
Fly 213 VVLDCEPNMLVELLNSSTEFGLTGQYNHIFLTNLETYTDHLEELAADNETFAVNITAARLLVNPD 277
Fly 278 PPPYSLPYGYVTQRDNIVYESSDPPRTLIHDLIHDALQLFAQSWRNASFFYPDRMVVPR--ITCD 340
Fly 341 FAASGGRTWAMGRYLARLMKGTSGVNNTNFRTSILQFDEDGQRITFNIEVYD-PLDGIGIA-IWD 403
Fly 404 PRGQIT-----QLNVDVKAQKKMIYRVATRIGPPYFSYNETARELNLTGNALYQGYAVDLIDAIA 463
Fly 464 RHVGFEYVFVPVADQQYGKLDKETKQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQL 528
Fly 529 GVSILAYKSPHVEKTLDAYLAPFGGEVWIWIL---ISVFVMTFLKTIVARISKMDW----ENPHP 586
Fly 587 CNRDPEV---LENQWRIHNTGWLTVASIMTAGCDILPRSPQVRMFEATWWIFAIIIANSYTANLA 648
Fly 649 AFLTSSKMEGSIANLKDLSAQKKVKFGTIYGGSTYNLLADSNETVYRLAFNLMNNDDPSAYTKDN 713
Fly 714 LEGVDRVRKNRGDYMFLMETTTLEY-HREQNCDLRSVGEKFGEKHYAIAVPFGAEYRSNLSVAIL 777
Fly 778 KLSERGELYDLKQKWWKNPNASCFE--EPDPDATPDMTFEELRGIFYTLYAGILIAFLIGITEFL 840
Fly 841 VYVQQVALEERLT-----FKDA 857 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 92/388 (24%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 18/85 (21%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 147/381 (39%) | ||
Lig_chan | 554..828 | CDD:278489 | 105/286 (37%) | ||
Gria3 | NP_001106213.1 | PBP1_iGluR_AMPA_GluR3 | 29..400 | CDD:107382 | 92/393 (23%) |
ANF_receptor | 40..383 | CDD:279440 | 86/365 (24%) | ||
PBP2_iGluR_AMPA | 416..799 | CDD:270433 | 148/390 (38%) | ||
Glutamate binding | 502..504 | 0/1 (0%) | |||
Lig_chan | 548..829 | CDD:278489 | 105/286 (37%) |