Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000827.2 | Gene: | GRIN2D / 2906 | HGNCID: | 4588 | Length: | 1336 | Species: | Homo sapiens |
Alignment Length: | 991 | Identity: | 207/991 - (20%) |
---|---|---|---|
Similarity: | 367/991 - (37%) | Gaps: | 231/991 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 73 SVTMQEHACDLID----NGVAAIFGPSSK--AASDIVALVCNSTGIPHIEFDISDEGIQAEKPNH 131
Fly 132 QMTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDARAAARLQDLLQLREVHNDVVRVRKFHK 196
Fly 197 ----------DDDFRVMWKSIRGERRVVL----DCEPNMLVELLNSSTEFGLTGQYNHIFLTNLE 247
Fly 248 TYTDHLEELAADNETFAVNITAARLLVNPDPPPY-----SLPYGYVT-----QRDNI-------V 295
Fly 296 YESSDPPRTLIHD------LIHD-----------ALQLFAQ--SWRNASFFYPD-------RMVV 334
Fly 335 PRITCDFAASGGRTWAM-------------------GRYLARLMKGTSGVNNTNFRTSILQFDED 380
Fly 381 GQRITFNIEVYDPLDGIGIAIWDPRGQI---TQLNVDVKAQKKMIYRVATRIGPPYFSYNETARE 442
Fly 443 LNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQWNGIIGEIINNDAHMGIC 507
Fly 508 DLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAYLAPFGGEVWIW--------ILISVF 564
Fly 565 VMTFLKTIVARISKMDWENPHPCNRDPEVLENQWRIHNTGWLTVASIMTAGCDI-LPRSPQVRMF 628
Fly 629 EATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQK------KVKFGTIYGGSTYNLLA 687
Fly 688 DSNETV--YRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEY--HREQNCDLRS 748
Fly 749 V--GEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQKWWKNPNASCFEEPDPDATPD 811
Fly 812 MTFEELRGIFYTLYAGILIAFLIGITEFLVYVQQ---VALEERLTFKDAFKKEIRFVLCVWNNRK 873
Fly 874 PIVAGTPISSVRTTPRRSLDKSLDRTPKSSRRVVIGRSSEEMREMAQGSGSSSGSNNA------- 931
Fly 932 --------GRGEKEAR 939 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 77/412 (19%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 26/145 (18%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 95/391 (24%) | ||
Lig_chan | 554..828 | CDD:278489 | 61/294 (21%) | ||
GRIN2D | NP_000827.2 | PBP1_iGluR_NMDA_NR2 | 49..413 | CDD:380601 | 64/353 (18%) |
PBP2_iGluR_NMDA_Nr2 | 430..830 | CDD:270436 | 108/456 (24%) | ||
Glutamate binding. /evidence=ECO:0000250|UniProtKB:Q00959 | 539..541 | 0/1 (0%) | |||
Pore-forming. /evidence=ECO:0000250|UniProtKB:Q00960 | 631..650 | 3/18 (17%) |