Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001317923.1 | Gene: | GRIK1 / 2897 | HGNCID: | 4579 | Length: | 949 | Species: | Homo sapiens |
Alignment Length: | 930 | Identity: | 275/930 - (29%) |
---|---|---|---|
Similarity: | 461/930 - (49%) | Gaps: | 121/930 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MWQRILLLGCMWS-AFFMC----RSRGQQINIGAFFYDDELE----LEKEFMTVVNAINGPES-- 54
Fly 55 EQTMRFYPLIKRLKPEDGSVTMQEHACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIEFDI 119
Fly 120 SDEGIQAEKPNHQM-TLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDARAAARLQDLLQLRE 183
Fly 184 VHNDVVRVRKFHK-DDDFRVMWKSIR--GERRVVLDCEPNMLVELLNSSTEFGLTGQYNHIFLTN 245
Fly 246 LETYTDHLEELAADNETF---AVNITAARLLVNPDPPPYSLPYGYVTQRDNIVYESS-----DPP 302
Fly 303 R----------TLIHDLIHDALQLFAQSWRNASFFYPDRMVVPRITCDFAASGGRTWAMGRYLAR 357
Fly 358 LMK-----GTSG---VNNTN-----FRTSILQFDEDG-QRITFNI--EVYDPLDGIGIAIWDPRG 406
Fly 407 --QITQLN-------VDVKAQKKMIYRVATRIGPPYFSYNETARELNLTGNALYQGYAVDLIDAI 462
Fly 463 ARHVGFEYVFVPVADQQYGKLDKETKQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQ 527
Fly 528 LGVSILAYKSPH-VEKTLDAYLAPFGGEVWIWILISVFVMTFLKTIVARISKMDWENPHPCNRDP 591
Fly 592 EVLENQWRIHNTGWLTVASIMTAGCDILPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKM 656
Fly 657 EGSIANLKDLSAQKKVKFGTIYGGSTYNLLADSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVR 721
Fly 722 KNRGDYMFLMETTTLEYHREQNCDLRSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELY 786
Fly 787 DLKQKWWKNPNASCFEEPDPDATPDMTFEELRGIFYTLYAGILIAFLIGITEFLVY-------VQ 844
Fly 845 QVALEERLTFKDAFKKEIRF 864 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 113/421 (27%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 21/103 (20%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 129/371 (35%) | ||
Lig_chan | 554..828 | CDD:278489 | 96/273 (35%) | ||
GRIK1 | NP_001317923.1 | Periplasmic_Binding_Protein_Type_1 | 35..430 | CDD:324556 | 114/431 (26%) |
Periplasmic_Binding_Protein_Type_2 | 446..815 | CDD:328725 | 130/376 (35%) | ||
Glutamate binding. /evidence=ECO:0000250 | 531..533 | 0/1 (0%) |