Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_505244.1 | Gene: | glr-5 / 179251 | WormBaseID: | WBGene00001616 | Length: | 932 | Species: | Caenorhabditis elegans |
Alignment Length: | 905 | Identity: | 240/905 - (26%) |
---|---|---|---|
Similarity: | 413/905 - (45%) | Gaps: | 142/905 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 ELELEKEFMTVVNAINGPESEQTMRFYPLIKRLKPEDGSVTMQEHACDLID-NGVAAIFGPSSKA 98
Fly 99 ASDIVALVCNSTGIPHIEF--DI-SDEGIQAEKPNHQMTLNLYPAQAILSKAYADIVQNFGWRKF 160
Fly 161 TIVYDADDARAAARLQDLLQLRE----------VHN-DVVRVRKFHKD-DDFRVMWKSIRGE-RR 212
Fly 213 VVLDCEPNMLVELLNSSTEFGLTGQYNHIFLTNLETYTDHLEELAADNETFAVN---------IT 268
Fly 269 AARLLVNPDPPPYSLPYGYVTQRDNIVYESSDPPRTLIHDLIHDALQLFAQSWRNASFFYPDRMV 333
Fly 334 VPRITCDFAASGGRTWAMGRYL---------------ARLMKGTSGVNNTNFRTSILQFDEDGQR 383
Fly 384 ITFNIEVYDPLDGIGIAIWDPRGQI-----------TQLNVDVKAQKKMIYRVATRIGPPYFSYN 437
Fly 438 ETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQWNGIIGEIINNDA 502
Fly 503 HMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEK-TLDAYLAPFGGEVWIWILISVFVM 566
Fly 567 TFLKTIVARISKMDW---------ENPHPC-----NRD-PEVLENQWRIHNTGWLTVASIMTAGC 616
Fly 617 DILPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQKKVKFGTIYGGS 681
Fly 682 TYNLLADSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEYHREQNCDL 746
Fly 747 RSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQKWWKNPNASCFE-----EPDP 806
Fly 807 DATPDMTFEELRGIFYTLYAGILIAFLIGITEFLVYVQQVALEERLTFKDAFKKEIRFVL 866 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 82/409 (20%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 17/98 (17%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 131/386 (34%) | ||
Lig_chan | 554..828 | CDD:278489 | 94/293 (32%) | ||
glr-5 | NP_505244.1 | PBP1_iGluR_delta_like | 26..418 | CDD:107376 | 83/418 (20%) |
ANF_receptor | 38..377 | CDD:279440 | 71/362 (20%) | ||
PBP2_iGluR_Kainate | 438..819 | CDD:270432 | 131/387 (34%) | ||
Lig_chan | 568..855 | CDD:278489 | 94/293 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D60688at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.020 |