Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006513350.1 | Gene: | Grin3b / 170483 | MGIID: | 2150393 | Length: | 1138 | Species: | Mus musculus |
Alignment Length: | 1062 | Identity: | 237/1062 - (22%) |
---|---|---|---|
Similarity: | 391/1062 - (36%) | Gaps: | 276/1062 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 44 TVVNAINGPESEQTMRFYPLIKRLKPEDGSVTMQEH--ACDLIDNGVAAIFGPSSKAAS------ 100
Fly 101 -----DIVALVCNSTGIPHIEFDISDEGIQAEKPNHQMTLNLYPAQAILSKAYADIVQNFGWRKF 160
Fly 161 TIVYDA--DDARAAARLQDLLQL-----------REVHNDVVRVRKFHKDDDFRVMWKSIRGERR 212
Fly 213 VVLD------------------C---EPNMLVELLNS----STEFGLTGQYNHIFLTNLETYTDH 252
Fly 253 LE---ELAADNETFAVNITAARLL-------------VNPDP-------------PPYSLPYGYV 288
Fly 289 TQRDNIVYESSDPPRTLIHDLIHDALQLFAQSWRNASFFYPDRMVVP-RITCDFAASGGRTWAMG 352
Fly 353 RYLARLMKGTSGVNNTNF--RTSILQFDEDGQ-RITFNIEVY----DPLDGIGIAIWDPRG--QI 408
Fly 409 TQLNVD-------------VKAQKKMIYRVATRIGPPYF--------------------SYNETA 440
Fly 441 RELNLTGNALYQ------------GYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQWNGI 493
Fly 494 IGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAYLAPFGGEVWIW 558
Fly 559 ILISVFVMTFLKTIVARISKMDWENPH---PCNRDPEVLENQWRIHNTGWLTVASIMTA------ 614
Fly 615 ---GCDI---LPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLS---AQK 670
Fly 671 KVKFGTIYGGSTYNLLADSNETVYRLAFNLMNNDDPSAYTKDNLEGV-----DRVRKNRGDYMFL 730
Fly 731 METTTLEYH--REQNCDLRSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQKWW 793
Fly 794 KNPNASC----FEEPDPDATPDMTFEELRGIFYTLYAGILIAFLIGITEFLVYVQQVALEERLTF 854
Fly 855 KDAFK-KEIRFVLCVWNNRKPIVAGTPISSVRTTPRRSLDKSLDRTPKSSRRVVIGRSSEEMR-- 916
Fly 917 EMAQGSGSSSGSNNAGRGEKEA 938 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 99/447 (22%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 20/84 (24%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 100/427 (23%) | ||
Lig_chan | 554..828 | CDD:278489 | 70/302 (23%) | ||
Grin3b | XP_006513350.1 | PBP1_iGluR_NMDA_NR3 | 141..481 | CDD:380600 | 82/387 (21%) |
PBP2_iGluR_NMDA_Nr3 | 494..888 | CDD:270438 | 100/431 (23%) | ||
Lig_chan | 656..922 | CDD:365843 | 70/302 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846270 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |