Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005165152.1 | Gene: | gria3a / 170452 | ZFINID: | ZDB-GENE-020125-5 | Length: | 903 | Species: | Danio rerio |
Alignment Length: | 824 | Identity: | 251/824 - (30%) |
---|---|---|---|
Similarity: | 384/824 - (46%) | Gaps: | 112/824 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 QINIGAFFYDDELELEKEFMTVVNAINGPE--SEQTMRFYPLIKRLKPEDG-SVTMQEHA-CDLI 84
Fly 85 DNGVAAIFGPSSKAASDIVALVCNSTGIPHIEFDISDEGIQAEKPNH---QMTLNLYPAQAILSK 146
Fly 147 AYADIVQNFGWRKFTIVYDAD--------------------DARAAARLQDLLQLREVHNDVVRV 191
Fly 192 RKFHKDDDFRVMWKSIRGERRVVLDCEPNMLVELLNSSTE----FGLTGQYNHIFLTNLETYTDH 252
Fly 253 LEELAADNETFAVNITAARLLVNPDPP---PYSLPYGYVTQRDNIVYESSDPPRTLIHDLIHDAL 314
Fly 315 QLFAQSWRNASFFYPDRMVVPR--ITCDFAASGGRTWAMGRYLARLMKGTSGVNNTNFRTSILQF 377
Fly 378 DEDGQRITFNIEVYD--PLDGIGIAIWDP--------RGQITQLNVDVKAQKKMIYRVATRIGPP 432
Fly 433 YFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQWNGIIGEI 497
Fly 498 INNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAYLAPFGGEVWIWIL-- 560
Fly 561 -ISVFVMTFLKTIVARISKMDWE-NPHPCNRDPEV---LENQWRIHNTGWLTVASIMTAGCDILP 620
Fly 621 RSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQKKVKFGTIYGGSTYNL 685
Fly 686 LADSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEY-HREQNCDLRSV 749
Fly 750 GEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQKWW 793 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 97/415 (23%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 19/88 (22%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 148/379 (39%) | ||
Lig_chan | 554..828 | CDD:278489 | 96/248 (39%) | ||
gria3a | XP_005165152.1 | PBP1_iGluR_AMPA_GluR3 | 28..399 | CDD:107382 | 97/420 (23%) |
ANF_receptor | 39..382 | CDD:279440 | 90/392 (23%) | ||
PBP2_iGluR_AMPA | 415..797 | CDD:270433 | 149/383 (39%) | ||
Lig_chan | 547..810 | CDD:278489 | 96/248 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591101 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.950 |