Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017169765.1 | Gene: | Grin2c / 14813 | MGIID: | 95822 | Length: | 1307 | Species: | Mus musculus |
Alignment Length: | 1005 | Identity: | 219/1005 - (21%) |
---|---|---|---|
Similarity: | 376/1005 - (37%) | Gaps: | 241/1005 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 43 MTVVNAINGPESEQT------MRFYPLIKRLKP--------EDGSVTMQEHACDLIDNGVAAIFG 93
Fly 94 ------PSSKAASDIVALVCNSTGIPHIEFDISDEGIQAEK-PNH---QMTLNLYPAQAILSKAY 148
Fly 149 ADIVQNFGWRKFTIVYD---------------ADDARAAARLQDLLQLR-EVHNDVVRVRKFHKD 197
Fly 198 DDFRVMWKSIRGERRVVLDCEPNMLVELLNSSTEFGLTGQYNHIFLT-NLETYTDHLEELAADNE 261
Fly 262 TFAVNITAARLLVNPDPPPYSLPYGYVTQRDNIVYESSDPPRTLIHDLIHDA---LQLFAQSWRN 323
Fly 324 ----------------------ASFFYPDRMVVPRITCDFAASGG----------------RTWA 350
Fly 351 M-GRYLARLMKGTSGVNNTNF-----RTSILQFDEDGQRITFN---------IEVYDPLDGIGIA 400
Fly 401 IWDPRGQITQLNVDVKAQKKMIYRVATRIGPPYFSYNETARELNLT--GNALYQGYAVDLIDAIA 463
Fly 464 RHVGFEYVFVPVADQQYGKLDKETKQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQL 528
Fly 529 GVSILAYKSPHVEKTLDAYLAPFGGEVWIWILISVFVMTFLKTIVARISKMDWENPHPCNRDPEV 593
Fly 594 LENQ------WRIHNTGWLTVASIMTAGCDI-LPRSPQVRMFEATWWIFAIIIANSYTANLAAFL 651
Fly 652 TSSKMEGSIANLKDLSAQK------KVKFGTIYGGST-YNLLADSNET-VYRLAFNLMNNDDPSA 708
Fly 709 YTKDNLEGVDRVRKNRGDYMFLMETTTLEY--HREQNCDLRSV--GEKFGEKHYAIAVPFGAEYR 769
Fly 770 SNLSVAILKLSERGELYDLKQKWWKNPNASCFEEPDPDATPDMTFEELRGIFYTLYAGILIAFLI 834
Fly 835 GITEFLVYVQ---QVALEERLTFKDAFKKEIRFVLCVWNNRKPIVAGTPISSVRTTPRRSLDKSL 896
Fly 897 DRTPKSSRRVVIG--RSSEEMREMAQGSGS 924 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 86/457 (19%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 26/125 (21%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 99/391 (25%) | ||
Lig_chan | 554..828 | CDD:278489 | 69/292 (24%) | ||
Grin2c | XP_017169765.1 | PBP1_iGluR_NMDA_NR2 | 90..446 | CDD:380601 | 77/409 (19%) |
PBP2_iGluR_NMDA_Nr2 | 462..868 | CDD:270436 | 109/450 (24%) | ||
NMDAR2_C | 905..>980 | CDD:371139 | 20/89 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846274 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |