Protein Alignment GluRIIC and LOC100334689

DIOPT Version :9

• Sequence 1: NP_608557.4
• Gene: GluRIIC / 33275
• FlyBaseID: FBgn0046113
• Length: 940
• Species: Drosophila melanogaster
• Sequence 2: XP_017206939.1
• Gene: LOC100334689 / 100334689
• -ID: -
• Length: 991
• Species: Danio rerio
• Alignment Length: 988
• Identity: 282/988 - (28%)
• Similarity: 471/988 - (47%)
• Gaps: 142/988 - (14%)

  Fly     5 ILLLGCMWSAFFMCRSRGQQINIGAFF--YDDELEL----EKEFMTVVNAINGPES--EQTMRFY 61
            |::|..:.|:|.|    ...|.||..|  .|..:.|    |..|...||.||...:  ..|...|
Zfish    15 IVVLFWIQSSFGM----PHVIRIGGIFEQTDGPVALVSSEELAFKFAVNNINRNRTLLPNTTLTY 75

  Fly    62 PLIKRLKPEDGSVTMQEHACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIEFDISDEGIQA 126
            . |:|:...| |......|||.:..||.||||||..::|:.|..:||:..:||         ||.
Zfish    76 D-IQRINIYD-SFEASRKACDQLSLGVVAIFGPSHSSSSNAVQSICNALEVPH---------IQV 129

  Fly   127 EKPNHQMT------LNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDARAAARLQDLLQLREVH 185
            ...:|.|.      .||||..:.||.|..|:||...|:..|:||  ||:....|||:|:.....:
Zfish   130 RWKHHPMDNRDTFYANLYPDYSSLSYAILDLVQFLKWKTATVVY--DDSTGLIRLQELIMAPSRY 192

  Fly   186 NDVVRVRKFHKDD-DFRVMWKSIRGER--RVVLDCEPNMLVELLNSSTEFGLTGQYNHIFLTNLE 247
            |..:::|:...|. |.|.:.|.::..|  |::.||...|..::|..:...|:..:|.|...|.|:
Zfish   193 NIRLKIRQLPMDTVDTRPLLKEMKRSREFRIIFDCSHTMAAQILKQAQMMGMMTEYYHYIFTTLD 257

  Fly   248 TYTDHLEELAADNETFAVNITAARLLVNPDPPPYSLPYGYVTQRDNIV----YESSDPPR----- 303
            ....:||..    ....||:|..|:| |.|.|          |..:||    .|...||:
Zfish   258 LMAINLEPY----RFCGVNMTGFRIL-NVDNP----------QVASIVEKWSLERQIPPKPDSGL 307

  Fly   304 -----TLIHDLIHDALQLFAQSWRNASFFYPDRMVVPRITCDFAASGGRTWAM-GRYLARLMKG- 361
                 |....|.:||:.:.:.|:::|     .:|.|..:.|    ...:.|.. ||:::.:.:.
Zfish   308 LEGIMTTDAALTYDAVHIVSVSYQHA-----PQMTVNSLQC----HRHKPWRFGGRFMSFIKESH 363

  Fly   362 ------------TSGVNNTNFRTSILQFDEDGQRITFNIEVYDPLDGIGIAIWDPRG--QITQ-- 410
                        |:|: .|:|...|:...|||            |..:|  .|...|  .||:
Zfish   364 WDGLTGRLCFNRTTGL-RTDFDLDIVSLKEDG------------LQKVG--KWSASGGLNITEVP 413

  Fly   411 ----LNV-DVKAQKKMIYRVATRIGPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEY 470
                :|: |..:.:.::  :.|.:..||....::.:.  |.||..::|:.:||:..:|..:||.|
Zfish   414 RQNGMNITDSLSNRSLV--ITTILEEPYVMLKKSDKA--LVGNDRFEGFCIDLLKELASILGFSY 474

  Fly   471 VFVPVADQQYGKLDKETKQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAY 535
            ....|.|.:||..| :..||||:|.|::.:.|.:.:..||||..|:.|:||:.||:..|:|||..
Zfish   475 EIHLVPDGKYGFQD-DKGQWNGMIRELMEHRADLAVAPLTITFMREKAIDFSKPFLNTGISILYR 538

  Fly   536 KSPHVEKTLDAYLAPFGGEVWIWILISVFVMTFLKTIVARISKMDWENPHPCNRDPEVLENQWRI 600
            |.........::|.|...::|::||::...::.:..::||.|..:|.:.||||...:|:||.:.:
Zfish   539 KPNSTNSGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSDVVENNFTL 603

  Fly   601 HNTGWLTVASIMTAGCDILPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKD 665
            .|:.|..|.|:|..|.:::|::...|:....||.|.:||.:|||||||||||..:|:..:.:..|
Zfish   604 LNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMDSPVDSADD 668

  Fly   666 LSAQKKVKFGTIYGGSTYNLLADSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFL 730
            |:.|.|:::|.:..|:|.:....|..:.:...:..|::...:::.|...:|:.||.|:  ||..|
Zfish   669 LAKQTKIEYGVVKDGATMSFFKKSRVSTFEKMWAFMSSRQSTSFVKSIEDGIQRVLKS--DYALL 731

  Fly   731 METTTLEYHREQNCDLRSVGEKFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQKWWKN 795
            ||:||:||...:||:|..||.....|.|.|..|.|:.||..:::|||.:.|.|.|:.||:|||.
Zfish   732 MESTTIEYVTRRNCNLTQVGGIIDSKGYGIGTPKGSPYRDKITIAILGILEDGRLHMLKEKWWS- 795

  Fly   796 PNASCFEEPDPDATPDMTFEELRGIFYTLYAGILIAFLIGITEFLVYVQQVALEERLTFKDAFKK 860
             .:||.|:...:..| |..:.|.|||..|.:|::::..:.|.||:..:::.|..|::
Zfish   796 -GSSCLEDERYETGP-MGIQNLGGIFIVLASGLVLSVFVAIGEFIYKLRKTAEREQV-------- 850

  Fly   861 EIRFVLCVWNNRKPIV--------AGTPISSVRTTPRRSLDKSLDRTPKSSRRVVIGRSSEEMRE 917
               |:.|.....:.:|        ...|.::......||...:|.:.|..:|:   |:...:.|:
Zfish   851 ---FLQCGDGRDQTVVHVRETGEAQAPPAAASHAEDGRSDQHALLQRPSPARK---GQHELQHRD 909

  Fly   918 MAQGSGSSSGSNN 930
            .|:.|.:..|..:
Zfish   910 DARVSMTCLGDGH 922

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluRIIC	NP_608557.4	PBP1_iGluR_Kainate	26..404	CDD:107377	114/422 (27%)
		Periplasmic_Binding_Protein_Type_1	<279..363	CDD:299141	19/111 (17%)
		PBP2_iGluR_Kainate	423..794	CDD:270432	126/370 (34%)
		Lig_chan	554..828	CDD:278489	95/273 (35%)
LOC100334689	XP_017206939.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170591049
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG60082
OrthoDB	1	1.010	-	-		D60688at33208
OrthoFinder	1	1.000	-	-		FOG0000021
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.860