Sequence 1: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009290417.1 | Gene: | LOC100149482 / 100149482 | -ID: | - | Length: | 1959 | Species: | Danio rerio |
Alignment Length: | 998 | Identity: | 194/998 - (19%) |
---|---|---|---|
Similarity: | 357/998 - (35%) | Gaps: | 291/998 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 67 LKPEDGSV-TMQEHACDLIDNGVAAIFGPSSKAASDIVALVCN-------STG--IPHIEFDISD 121
Fly 122 EGI------------QAEKPNHQMTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDARAAAR 174
Fly 175 LQDLLQLREVHND---------------------VVRVRKFHKDDDFRVMWKSIRGERRVVLDCE 218
Fly 219 PNMLVELLNSSTEFGLTGQYNHIFLTNLETYTDHLEELAADNETFAVNITAARLLVNPDPPPYSL 283
Fly 284 PYGYVTQRDNIVYESSDPPRTLIHDLIHDALQLFA---QSWRNASFFYPDRMVVPRITC------ 339
Fly 340 ----DFAASGG---------------RTWAMGRYLARLMKGTSGVNNTNFRTSILQFDEDGQRIT 385
Fly 386 FNIEV--YDPLDGIGIAIWDPRGQITQLNVDVKAQKKMIYRVATRIGPPYFSYNETARELN---- 444
Fly 445 ----------------------------LTGNALYQ----------GYAVDLIDAIARHVGFEYV 471
Fly 472 FVPVADQQYGKLDKETKQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYK 536
Fly 537 SPHVEKTLDAYLAPFGGEVWIWILISVFVMTFLKTIVARISKMDWENPHPCNRD----PEVLENQ 597
Fly 598 WRIHNTGWLTVASIMTAGCDI-LPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIA 661
Fly 662 NLKDLSAQ------KKVKFGTIYGGSTYNLLADSNETV--YRLAFNLMNNDDPSAYTKDNLEGVD 718
Fly 719 RVRKNRGDYMFLMETTTLEY--HREQNCDLRSV--GEKFGEKHYAIAVPFGAEYRSNLSVAILKL 779
Fly 780 SERGELYDLKQKWWKNPNASCFEEPDPDATPDMTFEELRGIFYTLYAGILIAFLIGITEFLVY-- 842
Fly 843 ----VQQVALEERLTFKDAFKKEIRFVLCVWNNR------KPIVAGTPISSVRTTPRRSLDKSLD 897
Fly 898 RTPKSSRRVVIGRSSEEMREMAQ 920 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 65/409 (16%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 16/111 (14%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 102/429 (24%) | ||
Lig_chan | 554..828 | CDD:278489 | 62/290 (21%) | ||
LOC100149482 | XP_009290417.1 | PBP1_iGluR_NMDA_NR2 | 44..421 | CDD:107373 | 67/433 (15%) |
PBP2_iGluR_NMDA_Nr2 | 433..831 | CDD:270436 | 98/419 (23%) | ||
HisJ | <487..>570 | CDD:223904 | 33/85 (39%) | ||
Lig_chan | 585..857 | CDD:278489 | 62/290 (21%) | ||
NMDAR2_C | 868..>900 | CDD:287527 | 7/32 (22%) | ||
FAM76 | <1763..>1856 | CDD:292665 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591037 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |