DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsp1beta and CG8100

DIOPT Version :9

Sequence 1:NP_001285556.1 Gene:Lsp1beta / 33274 FlyBaseID:FBgn0002563 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001261825.1 Gene:CG8100 / 39565 FlyBaseID:FBgn0036410 Length:648 Species:Drosophila melanogaster


Alignment Length:709 Identity:152/709 - (21%)
Similarity:282/709 - (39%) Gaps:192/709 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KQKFLFEIVYRVEDPLMFEDHIKQGEKFYFE-ESYYTHYDMYMKKFFEAYKAHALLPKGEFFGAL 98
            :|.||..::.:|..||:.|:.|..|.:...: :||......|:|.|.|  :.|.....|.|   :
  Fly    43 RQYFLLNLLIQVHKPLLHEELITMGSQLNDDPDSYKEGTWRYIKDFRE--RVHQNRVPGPF---V 102

  Fly    99 VMSHAKQAR-----GLFNFFYYAKDWETFAANVAWARMHVNEGMFVYALTMAVIHRNDFHGLMLP 158
            :::...:..     |::.|...|.||.:|..|..:||:|.:..:||.||.|||..|.|...|.:|
  Fly   103 ILNQLDEEMPLNLLGIYRFLTMAVDWTSFQRNACFARIHFHPLLFVNALQMAVEEREDTKDLRMP 167

  Fly   159 SIYEIFPQFFFNSKFVFEAEKFDYEMW--MKMTMYEKEYMDVYYKTNGYDYSTMYRSSDYTYMKD 221
            ::||:.||.:|..:.:..|::..:...  :::...::.::|:                       
  Fly   168 AMYEVLPQLYFEKEVILTAQEVTWNQLSPIRLVTPKRRWIDI----------------------- 209

  Fly   222 FKTWQWWKLMGLGEHWYTEDKFILRENIYEFNQETKWLSMMKDVKKFYMPVDYTRDLNLYNKESK 286
                    |:|                 |. |.:..|:      ::..:|.|..    :.:...|
  Fly   210 --------LLG-----------------YR-NPKQPWM------EEEPIPTDPL----IIDNARK 238

  Fly   287 LSYFTEDLGWNAYWYYL-------------NMDYSFFLDGN-------TFDLKNDRR-------- 323
            ::|.:.||..|::|..|             ..:....:||:       :||..|.::        
  Fly   239 VAYLSLDLELNSHWNSLITRLIISIEEGKEKTNEPIIIDGDRLVAFRGSFDEVNFKKHLALGSHF 303

  Fly   324 --GEWWLYNVHQLLSRYYMERLSHGFGEIPEFSWYQQIEMGYDPQLIYYNGIGYSFRKNYYEMET 386
              .:.:|||:||.::...||.|:.|         .:..|:.| |.|:...|:.|.        .|
  Fly   304 HNTKLYLYNLHQFVAALSMEDLATG---------QKSTELIY-PPLMTTGGVPYK--------GT 350

  Fly   387 YANYDMLDKITGFLKRIHNIVEMGYYKTADGHTIDLRKPEAIEFIGNMLQGNVDAMDKMFYQFWY 451
            ..|          ::.:..|:::         |||..| :.||.   .::.|..|||.:... ..
  Fly   351 SLN----------IEAVRGIIDL---------TIDGLK-DKIEM---AVKHNNHAMDNLSIA-GG 391

  Fly   452 MLAHMYFADADYYQMDV------YPNVMLNFETMMRDPMYYMFYKSIAQVYFQFMHYLPKYTKEQ 510
            ::.:.|........:.|      .|:::.:..:.:|||:|       ..:.|:....|..|..|.
  Fly   392 IIGNNYLHICRQLNLAVNGQGINQPSMLGSATSNLRDPIY-------RSLLFRIYDLLKSYENEN 449

  Fly   511 LLMPGV----TMK--NVEVSDLTTYFDLVDFDVTNMLNDKMIFQDGKFVWDM--SLFARQMRLNH 567
             :.|.|    |.|  :::||.|.|:.:.:..|:.|:::.:::......:..:  :|.|||.||||
  Fly   450 -IFPDVGGRETPKIVDIQVSRLVTFEETMTTDLINLIDQQLLLSHRNNLQFLRRNLVARQHRLNH 513

  Fly   568 KPFTYTYTIESEKVEKVVIRAFLGPKFDEFGKVISLAENRMNFMEIDEFYYELKAGTNKITRKSS 632
            .||:....|.:.  |.:|:.|.:         .:||.......:.:|.|...||.|.|...|:  
  Fly   514 DPFSIGLDIVAP--ENLVVEARM---------YLSLPNQLRLRLHLDSFKCSLKRGLNHFERQ-- 565

  Fly   633 EFYWTVKDRTTYTELYYYTMMAFDGKYDF-PLDISEPHCGFPDRLVLPMGWQKGMPMQM 690
              :.|...:.|.:|||         :.|: ..|::..: .||..|.||.|...|:.:|:
  Fly   566 --FPTAISKPTLSELY---------EADYASTDVTTSN-RFPPHLQLPRGTGDGLKLQL 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp1betaNP_001285556.1 Hemocyanin_N 32..154 CDD:281684 37/124 (30%)
Hemocyanin_M 161..496 CDD:278784 61/372 (16%)
Hemocyanin_C 505..755 CDD:281685 50/195 (26%)
CG8100NP_001261825.1 Hemocyanin_N 41..163 CDD:281684 37/124 (30%)
Hemocyanin_C 444..>621 CDD:281685 50/195 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470646
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28IXN
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0012705
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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