DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and ppiB

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_415058.1 Gene:ppiB / 949038 ECOCYCID:EG10758 Length:164 Species:Escherichia coli


Alignment Length:160 Identity:48/160 - (30%)
Similarity:73/160 - (45%) Gaps:22/160 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGD 105
            |.|....|...||:||.||...|..|.    |..:.||||::.|::|||....|     :.....
E. coli     9 GDIVIKTFDDKAPETVKNFLDYCREGF----YNNTIFHRVINGFMIQGGGFEPG-----MKQKAT 64

  Fly   106 YFPDEDKALAVEHNRPGYLGMA-NRGPDTNGCQFYVTTVGAKWLD--GK------HTVFGKVLEG 161
            ..|.:::|.....|..|.|.|| .:.|.:...||::..|...:|:  |:      :.||.:|::|
E. coli    65 KEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDG 129

  Fly   162 MDTIYAIEDVKTDT----DDFPVEPVVISN 187
            ||.:..|:.|.|..    .|.|.|.|:|.:
E. coli   130 MDVVDKIKGVATGRSGMHQDVPKEDVIIES 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 48/160 (30%)
ppiBNP_415058.1 PRK10791 1..164 CDD:182734 48/160 (30%)

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