DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and ppiA

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_417822.1 Gene:ppiA / 947870 ECOCYCID:EG10757 Length:190 Species:Escherichia coli


Alignment Length:196 Identity:54/196 - (27%)
Similarity:84/196 - (42%) Gaps:24/196 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SAFLAVASGLSFTVTSRIYMDVKHN-----KKPVGRITFGLFGKLAPKTVANFRHICLRGINGTS 71
            |...|:|:..:.:..|...|..|.:     ....|.|...|..:.||.:|.||    :..:|...
E. coli     4 STLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELELDKQKAPVSVQNF----VDYVNSGF 64

  Fly    72 YVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRG-PDTNG 135
            |..:.||||:..|::|||..     |..:.......|.:::|.....|..|.:.||... .|:..
E. coli    65 YNNTTFHRVIPGFMIQGGGF-----TEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSAT 124

  Fly   136 CQFYVTTVGAKWLD-GK----HTVFGKVLEGMDTIYAIEDVKTDT----DDFPVEPVVISNCGEI 191
            .||::......:|| |:    :.|||||::|||....|..|.|..    .:.|.:||||.:...:
E. coli   125 SQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSAKVL 189

  Fly   192 P 192
            |
E. coli   190 P 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 50/176 (28%)
ppiANP_417822.1 PRK10903 1..190 CDD:182824 53/194 (27%)

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