DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and Pnsl5

DIOPT Version :9

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_196816.1 Gene:Pnsl5 / 831151 AraportID:AT5G13120 Length:259 Species:Arabidopsis thaliana


Alignment Length:174 Identity:81/174 - (46%)
Similarity:112/174 - (64%) Gaps:6/174 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VTSRIYMDVKHNK---KPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLV 86
            :|.::|.|:....   |..|||..||:|...|:||.|||.:| .|..|..|.||.||||:..|::
plant    88 ITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALC-TGEKGFGYKGSTFHRVIRDFMI 151

  Fly    87 QGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGK 151
            ||||...|:|||..|:||..|.||:..|:  |..||.|.|||.||:|||.||::.|:...||||:
plant   152 QGGDFEKGNGTGGKSVYGRTFKDENFKLS--HVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGR 214

  Fly   152 HTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGEIPTEQ 195
            |.|||:|:|||:.:..||:.:||..|.|.:.|||::||::|..:
plant   215 HVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQLPMSE 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:294131 77/164 (47%)
Pnsl5NP_196816.1 cyclophilin_ABH_like 90..252 CDD:238907 77/164 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1403619at2759
OrthoFinder 1 1.000 - - FOG0000032
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.780

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