DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaA and AT3G63400

DIOPT Version :9

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_001190169.1 Gene:AT3G63400 / 825515 AraportID:AT3G63400 Length:570 Species:Arabidopsis thaliana


Alignment Length:169 Identity:77/169 - (45%)
Similarity:100/169 - (59%) Gaps:10/169 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICL--RGINGTS-----YVGSRFHRVVDRFLV 86
            :::||.....||.||...||..:.|||..|||.:|.  .|:..::     :.||.||||:..|:.
plant     9 VFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMA 73

  Fly    87 QGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGK 151
            ||||..||:|||..||||..|.||:  ..::|:..|.|.|||.||:|||.||::.......||||
plant    74 QGGDFSNGNGTGGESIYGGKFSDEN--FRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGK 136

  Fly   152 HTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGE 190
            |.|||||:|||..|..:|.|.| :|..|..||.|.:|||
plant   137 HVVFGKVVEGMAVIKKMELVGT-SDGKPTSPVKIIDCGE 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:294131 74/166 (45%)
AT3G63400NP_001190169.1 cyclophilin_ABH_like 7..173 CDD:238907 74/166 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1403619at2759
OrthoFinder 1 1.000 - - FOG0000032
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.