DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and CYP71

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_190046.2 Gene:CYP71 / 823585 AraportID:AT3G44600 Length:631 Species:Arabidopsis thaliana


Alignment Length:229 Identity:89/229 - (38%)
Similarity:110/229 - (48%) Gaps:63/229 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLNRIILCSAFLAVASGLSFTVTSRIYM----------------DVKHNKKP------------- 39
            |.:..|||.||          ...||||                || .|:||             
plant   415 LTDPTILCCAF----------KKHRIYMFSRREPEEPEDASQGRDV-FNEKPAADELMSVSDIGN 468

  Fly    40 ---------------VGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGG 89
                           :|.|...|:.:..||||.||...|..|.    |....||||:..|::|.|
plant   469 SATTSLPENVIMHTTLGDIHMKLYPEECPKTVENFTTHCRNGY----YDNHLFHRVIRGFMIQTG 529

  Fly    90 DIVNGDGTGSISIYGDYFPDE-DKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHT 153
            |.: |||||..||:|..|.|| .|:|  .|:||..|.|||.||:|||.||::|||...|||.|||
plant   530 DPL-GDGTGGQSIWGREFEDEFHKSL--RHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHT 591

  Fly   154 VFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISN 187
            |||:|::|||.:..||.||||.:|.|.:.|.|.|
plant   592 VFGRVVKGMDVVQGIEKVKTDKNDRPYQDVKILN 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 83/206 (40%)
CYP71NP_190046.2 WD40 <68..286 CDD:475233
WD40 repeat 73..111 CDD:293791
WD40 repeat 117..154 CDD:293791
WD40 repeat 157..200 CDD:293791
WD40 repeat 207..253 CDD:293791
cyclophilin_WD40 479..626 CDD:238908 74/154 (48%)
Blue background indicates that the domain is not in the aligned region.

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