DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and Ppil2

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:XP_006522510.1 Gene:Ppil2 / 66053 MGIID:2447857 Length:564 Species:Mus musculus


Alignment Length:188 Identity:70/188 - (37%)
Similarity:95/188 - (50%) Gaps:32/188 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SFTVTSRI----------------YMDVK-------HNKKPVGRITFGLFGKLAPKTVANFRHIC 63
            |||.|:.:                |..||       |..|  |.:...|...|.|||..||..:|
Mouse   249 SFTSTAMVPETTHEAAVIDEDVLRYQFVKKKGYVRLHTNK--GDLNLELHCDLTPKTCENFIKLC 311

  Fly    64 LRGINGTSYVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMAN 128
            .:    ..|.|:.|||.:..|::|||| ..|.|||..|.:|..|.||.:. .:.|...|.|.|||
Mouse   312 KK----QYYDGTIFHRSIRNFVIQGGD-PTGTGTGGESFWGKPFKDEFRP-NLSHTGRGVLSMAN 370

  Fly   129 RGPDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTIYAIEDVKTD-TDDFPVEPVVI 185
            .||:||..||::|.....:||.|||:||:|:.|.||:.|:|:|::| ..|.|.|.|:|
Mouse   371 SGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENVESDPKTDRPKEEVLI 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 66/183 (36%)
Ppil2XP_006522510.1 RING-Ubox_PPIL2 38..110 CDD:438325
RING_Ubox 101..159 CDD:473075
cyclophilin_RING 281..440 CDD:238904 63/156 (40%)
Blue background indicates that the domain is not in the aligned region.

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