DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaA and RANBP2

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:XP_005264059.1 Gene:RANBP2 / 5903 HGNCID:9848 Length:3258 Species:Homo sapiens


Alignment Length:186 Identity:78/186 - (41%)
Similarity:106/186 - (56%) Gaps:4/186 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NRIILCSAFLAVASGLSFTVTSRIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICLRGINGT 70
            |.:.|....:::|:.||......::.||..:.:|:||||..||..:.|:|..|||.:| .|..|.
Human  3077 NLMKLQKGHVSLAAELSKETNPVVFFDVCADGEPLGRITMELFSNIVPRTAENFRALC-TGEKGF 3140

  Fly    71 SYVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNG 135
            .:..|.||||:..|:.|||||...||||..|||||.|.||:  ..|:|..||.|.|||:|.:||.
Human  3141 GFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDEN--FDVKHTGPGLLSMANQGQNTNN 3203

  Fly   136 CQFYVTTVGAKWLDGKHTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGEI 191
            .||.:|...|:.||.||.|||.|.:||||:..||...:..... ...:.|:.||:|
Human  3204 SQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSV-CRRITITECGQI 3258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 70/161 (43%)
RANBP2XP_005264059.1 LapB <33..222 CDD:442196
TPR repeat 59..89 CDD:276809
TPR repeat 94..123 CDD:276809
RanBD1_RanBP2-like 1186..1302 CDD:270203
zf-RanBP 1351..1381 CDD:395516
RanBP2-type Zn finger 1355..1375 CDD:275375
zf-RanBP 1415..1443 CDD:395516
RanBP2-type Zn finger 1419..1438 CDD:275375
zf-RanBP 1479..1508 CDD:395516
RanBP2-type Zn finger 1483..1502 CDD:275375
zf-RanBP 1543..1572 CDD:395516
RanBP2-type Zn finger 1547..1566 CDD:275375
zf-RanBP 1606..1635 CDD:395516
RanBP2-type Zn finger 1610..1629 CDD:275375
zf-RanBP 1665..1694 CDD:395516
RanBP2-type Zn finger 1669..1688 CDD:275375
zf-RanBP 1724..1753 CDD:395516
RanBP2-type Zn finger 1728..1747 CDD:275375
zf-RanBP 1781..1809 CDD:395516
RanBP2-type Zn finger 1785..1804 CDD:275375
RanBD2_RanBP2-like 2027..2143 CDD:269998
RanBD3_RanBP2-like 2324..2440 CDD:270204
IR1-M 2657..2719 CDD:463488
IR1-M 2735..2791 CDD:463488
RanBD4_RanBP2-like 2959..3075 CDD:269999
cyclophilin_ABH_like 3098..3256 CDD:238907 70/161 (43%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.