DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and ppie

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_001017678.1 Gene:ppie / 550373 ZFINID:ZDB-GENE-050417-167 Length:302 Species:Danio rerio


Alignment Length:163 Identity:77/163 - (47%)
Similarity:101/163 - (61%) Gaps:4/163 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGGDIV 92
            ::|||:|...||.||:.|.|...:.|.|..|||.:|... .|..:.||.|||::.:|:.||||..
Zfish   142 QVYMDIKIGNKPAGRLRFLLRADVVPMTAENFRCLCTHE-KGFGFKGSSFHRIIPQFMCQGGDFT 205

  Fly    93 NGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGK 157
            |.:|||..||||..|.||:  ..::|...|.|.|||.||:|||.||::|.....||||||.|||:
Zfish   206 NHNGTGGKSIYGRKFEDEN--FVLKHTHAGQLSMANSGPNTNGSQFFITVDKTDWLDGKHVVFGE 268

  Fly   158 VLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGE 190
            :.||||.:.|:|...| .|..|.:.|:||||||
Zfish   269 LTEGMDVLRAMEAQGT-KDGKPKQKVIISNCGE 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 74/160 (46%)
ppieNP_001017678.1 RRM_PPIE 8..82 CDD:409783
cyclophilin_ABH_like 141..299 CDD:238907 74/160 (46%)
Blue background indicates that the domain is not in the aligned region.

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