DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaA and ppig

DIOPT Version :9

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_998629.1 Gene:ppig / 406773 ZFINID:ZDB-GENE-040426-2822 Length:687 Species:Danio rerio


Alignment Length:171 Identity:75/171 - (43%)
Similarity:102/171 - (59%) Gaps:9/171 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICL--RGINGTS-----YVGSRFHRVVDRFL 85
            |.:.|:..:..|.||:...||..:.|||..|||.:|.  :|:..|:     |.|:.|||:|..|:
Zfish     9 RCFFDIGISNVPAGRVVIELFSDVCPKTCENFRCLCTGEKGVGKTTQKPLHYKGTPFHRIVKDFM 73

  Fly    86 VQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDG 150
            :||||...|:|.|..||||.:|  ||.:.:::|.:...|.|||||.||||.||::||.....|||
Zfish    74 IQGGDFSEGNGRGGESIYGGFF--EDGSFSMKHTKEFLLSMANRGKDTNGSQFFITTKPTPHLDG 136

  Fly   151 KHTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGEI 191
            .|.|||:|:.|.|.|..||..||||:..|...|.:.||||:
Zfish   137 IHVVFGQVITGQDVIRMIESQKTDTNSRPYAEVKVLNCGEL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:294131 72/167 (43%)
ppigNP_998629.1 cyclophilin 8..175 CDD:294131 72/167 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1403619at2759
OrthoFinder 1 1.000 - - FOG0000032
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.