DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment ninaA and ppih

DIOPT Version :9

Sequence 1:	NP_476656.1	Gene:	ninaA / 33271	FlyBaseID:	FBgn0002936	Length:	237	Species:	Drosophila melanogaster
Sequence 2:	NP_989366.1	Gene:	ppih / 394997	XenbaseID:	XB-GENE-485863	Length:	177	Species:	Xenopus tropicalis

Alignment Length:	168	Identity:	79/168 - (47%)
Similarity:	103/168 - (61%)	Gaps:	8/168 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly    29 IYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICL-----RGINGTSYVGSRFHRVVDRFLVQG 88
            ::.|:....:.|||:...||..:.|||..|||..|.     .|: ...|.||.||||:..|::||
Frog    13 VFFDISIGGQEVGRMKVELFADIVPKTAENFRQFCTGEFRKDGV-PIGYKGSTFHRVIKDFMIQG 76

  Fly    89 GDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHT 153
            ||.|||||||..|||...|.||:  ...:|:.||.|.|||.||.||||||::|.....||||||.
Frog    77 GDFVNGDGTGVASIYRGPFADEN--FKQKHSTPGLLSMANSGPGTNGCQFFITCSKCDWLDGKHV 139

  Fly   154 VFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGEI 191
            |||||::|:..:..||:|.|..::.|..||||:.|||:
Frog   140 VFGKVIDGLLVMRKIENVPTGPNNKPKLPVVIAQCGEM 177

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ninaA	NP_476656.1	cyclophilin	27..189	CDD:294131	76/164 (46%)
ppih	NP_989366.1	cyclophilin	5..177	CDD:381853	78/166 (47%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1403619at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010