DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaA and ppia

DIOPT Version :9

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_988875.1 Gene:ppia / 394470 XenbaseID:XB-GENE-5778000 Length:164 Species:Xenopus tropicalis


Alignment Length:164 Identity:70/164 - (42%)
Similarity:99/164 - (60%) Gaps:4/164 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGGDIV 92
            |::.|:..:..|:|||...|...:.|||..|||.:|... .|..|..|.|||::..|:.||||..
 Frog     5 RVFFDIAVDGCPMGRIIMELRSDVVPKTAENFRALCTNE-KGFGYKNSGFHRIIPEFMCQGGDFT 68

  Fly    93 NGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGK 157
            |.:|||..||||:.|.||:  ..:.|..||.|.|||.|.:|||.||::.|....||||||.|||.
 Frog    69 NHNGTGGKSIYGNKFADEN--FQLRHTGPGILSMANAGANTNGSQFFICTAKTSWLDGKHVVFGT 131

  Fly   158 VLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGEI 191
            |::|||.:..:|.:.:.:.. |.:.:||:|||::
 Frog   132 VIDGMDVVRNMEKLGSQSGK-PAKKIVIANCGQL 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:294131 68/160 (43%)
ppiaNP_988875.1 cyclophilin_ABH_like 4..162 CDD:238907 68/160 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1403619at2759
OrthoFinder 1 1.000 - - FOG0000032
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.