DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and ppil2

DIOPT Version :9

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_957285.2 Gene:ppil2 / 393966 ZFINID:ZDB-GENE-040426-1096 Length:524 Species:Danio rerio


Alignment Length:164 Identity:62/164 - (37%)
Similarity:91/164 - (55%) Gaps:11/164 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VTSRIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGG 89
            |..:.|:.:..||   |.:...|.....||...||..:|.:|.    |.|:.|||.:..|::|||
Zfish   276 VKKKGYVRLHTNK---GDLNVELHCDKVPKAGENFIKLCKKGY----YDGTVFHRSIRNFMIQGG 333

  Fly    90 DIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTV 154
            | ..|.|||..|.:|..|.||.:. .:.|...|.|.|||.||:||..||::|.....:||.||:|
Zfish   334 D-PTGTGTGGESFWGKPFKDEFRP-NLSHTGRGILSMANSGPNTNKSQFFITFRSCAYLDRKHSV 396

  Fly   155 FGKVLEGMDTIYAIEDVKTD--TDDFPVEPVVIS 186
            ||:|:.|::|:.|:|:|::|  ||....|..::|
Zfish   397 FGRVVGGLETLSAMENVESDPKTDKPKSEIKILS 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:294131 61/162 (38%)
ppil2NP_957285.2 Ubox 42..96 CDD:128780
cyclophilin_RING 281..440 CDD:238904 61/159 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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