DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and CG3511

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_611935.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster


Alignment Length:171 Identity:76/171 - (44%)
Similarity:98/171 - (57%) Gaps:15/171 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 TVTSRIYMD-VKHNKKPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQ 87
            :|..|||.: |.|..|  |.|...||.|..||||.||   |:...|| .|.|..||||:..|:||
  Fly   475 SVVQRIYENVVLHTTK--GDIHMRLFFKEVPKTVENF---CVHAKNG-YYNGHIFHRVIKGFMVQ 533

  Fly    88 GGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKH 152
            .|| ..|.|||..||:|..|.|| ...:::|:||..:.|||.||:|||.||::|.:...|||.||
  Fly   534 TGD-PTGTGTGGKSIWGSDFKDE-FVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPTPWLDNKH 596

  Fly   153 TVFGKVLEGMDTIYAI----EDVKTDT--DDFPVEPVVISN 187
            ||||:|..||:.:..|    .:.|||.  ||..:..:.:||
  Fly   597 TVFGRVYRGMEVVLNICNSKANPKTDKPYDDIKIISIHLSN 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 75/168 (45%)
CG3511NP_611935.1 WD40 repeat 85..122 CDD:293791
WD40 <94..310 CDD:441893
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 70/155 (45%)
Blue background indicates that the domain is not in the aligned region.

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