DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and Cwc27

DIOPT Version :9

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:XP_017446439.1 Gene:Cwc27 / 361887 RGDID:1310697 Length:471 Species:Rattus norvegicus


Alignment Length:155 Identity:65/155 - (41%)
Similarity:82/155 - (52%) Gaps:11/155 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KKPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGGDIVNGDGTGSIS 101
            |...|.|...|:.|.|||...||..:||...    |..:.|||||..|:||||| ..|.|||..|
  Rat    18 KTTAGDIDIELWSKEAPKACRNFIQLCLEAY----YDNTIFHRVVPGFIVQGGD-PTGTGTGGES 77

  Fly   102 IYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTIY 166
            :||..|.||..: .:..||.|.:.|||.||..||.||:.|...|..|:.|||:||||..  ||:|
  Rat    78 VYGAPFKDEFHS-RLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTG--DTVY 139

  Fly   167 ---AIEDVKTDTDDFPVEPVVISNC 188
               .:.:|..|.::.|..|..|.:|
  Rat   140 NMLRLTEVDIDDEERPRNPHRIKSC 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:294131 65/155 (42%)
Cwc27XP_017446439.1 cyclophilin_CeCYP16-like 8..177 CDD:238906 65/155 (42%)
TMEM119 <308..>359 CDD:292352
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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