DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and Ppie

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_001382655.1 Gene:Ppie / 298508 RGDID:1311411 Length:301 Species:Rattus norvegicus


Alignment Length:163 Identity:73/163 - (44%)
Similarity:100/163 - (61%) Gaps:4/163 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGGDIV 92
            ::|||:|...||.|||...|...:.|.|..|||.:|... .|..:.||.|||::.:|:.||||..
  Rat   141 QVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHE-KGFGFKGSSFHRIIPQFMCQGGDFT 204

  Fly    93 NGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGK 157
            |.:|||..||||..|.||:  ..::|..||.|.|||.||:|||.||::|.....||||||.|||:
  Rat   205 NHNGTGGKSIYGKKFDDEN--FILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGE 267

  Fly   158 VLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGE 190
            :.:|:|.:..|| .:...|..|.:.|:|::|||
  Rat   268 ITDGLDVLRQIE-AQGSKDGKPKQKVIIADCGE 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 70/160 (44%)
PpieNP_001382655.1 RRM_PPIE 8..82 CDD:409783
cyclophilin_ABH_like 140..298 CDD:238907 70/160 (44%)
Blue background indicates that the domain is not in the aligned region.

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