DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and wis2

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_594787.1 Gene:wis2 / 2542541 PomBaseID:SPAC1B3.03C Length:356 Species:Schizosaccharomyces pombe


Alignment Length:193 Identity:84/193 - (43%)
Similarity:113/193 - (58%) Gaps:26/193 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 YMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICLRGING-------TSYVGSRFHRVVDRFLVQ 87
            |..:..:.|....|.|.||..:.||||.||..:|    ||       .:|.|||||||:..|::|
pombe     6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLC----NGFEKDGRCLTYKGSRFHRVIKNFMLQ 66

  Fly    88 GGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKH 152
            |||...|:|||..||||:.|.||:  ..::|::|..|.|||.||:|||.||::|||....|||||
pombe    67 GGDFTRGNGTGGESIYGEKFEDEN--FELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKH 129

  Fly   153 TVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCG------------EIPTEQFEFYPDDF 203
            .|||||::|..|:..||:::|..|| ||.||||..||            ::..:..|.:|||:
pombe   130 VVFGKVIQGKSTVRTIENLETKNDD-PVVPVVIEECGTCTKDQIEAPKPDVTGDSLEEFPDDY 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 78/165 (47%)
wis2NP_594787.1 cyclophilin 6..165 CDD:469651 78/165 (47%)
TPR repeat 204..253 CDD:276809
Spy 210..>323 CDD:443119
TPR repeat 258..288 CDD:276809
TPR repeat 293..323 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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