DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and cyp4

DIOPT Version :9

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_596532.1 Gene:cyp4 / 2541395 PomBaseID:SPBP8B7.25 Length:201 Species:Schizosaccharomyces pombe


Alignment Length:202 Identity:93/202 - (46%)
Similarity:119/202 - (58%) Gaps:6/202 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKSLLNRIILCSAFLAVASGLSFTVTSRIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICLR 65
            ||.....::....|..:::.....||..:|.|::...:.:||:|.|||||..|||..|||.:. .
pombe     1 MKLFYFSLLFTLFFGLISANRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALA-T 64

  Fly    66 GINGTSYVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRG 130
            |..|..|.||.||||:..|::|||||..|||||..||||..||||:..|:  |.|||.|.|||.|
pombe    65 GEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLS--HQRPGLLSMANAG 127

  Fly   131 PDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGEIPTEQ 195
            ||:||.||::|||...||||.|.|||:||.|.|.:..|...:||..|.|:|.|.|...|::..|.
pombe   128 PDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKIIKSGQLSQEN 192

  Fly   196 FEFYPDD 202
            .|   ||
pombe   193 VE---DD 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:294131 83/161 (52%)
cyp4NP_596532.1 cyclophilin 27..186 CDD:294131 83/161 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000032
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11071
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.870

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