DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and cyn-3

DIOPT Version :9

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_506751.1 Gene:cyn-3 / 180028 WormBaseID:WBGene00000879 Length:173 Species:Caenorhabditis elegans


Alignment Length:172 Identity:75/172 - (43%)
Similarity:109/172 - (63%) Gaps:11/172 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SRIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICLRGINGTS-------YVGSRFHRVVDRF 84
            |:::.|:....|..|||...|:..:.|||..|||.:| .|.||..       :.||:|||::..|
 Worm     4 SKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALC-TGENGIGKSGKPLHFKGSKFHRIIPNF 67

  Fly    85 LVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLD 149
            ::||||...|:|||..||||:.||||:  ...:|..||.|.|||.||:|||.||::.||..:|||
 Worm    68 MIQGGDFTRGNGTGGESIYGEKFPDEN--FKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLD 130

  Fly   150 GKHTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGEI 191
            |||.|||:|:||:|.:.|:|...:.:.. ||:..:|::||::
 Worm   131 GKHVVFGRVVEGLDVVKAVESNGSQSGK-PVKDCMIADCGQL 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:294131 73/168 (43%)
cyn-3NP_506751.1 cyclophilin_ABH_like 4..169 CDD:238907 73/168 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1403619at2759
OrthoFinder 1 1.000 - - FOG0000032
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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