DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and cyn-1

DIOPT Version :9

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_506561.1 Gene:cyn-1 / 179936 WormBaseID:WBGene00000877 Length:192 Species:Caenorhabditis elegans


Alignment Length:200 Identity:80/200 - (40%)
Similarity:114/200 - (56%) Gaps:14/200 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKSLLNRIILCSAFLAVASGLSFTVTSRIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICL- 64
            ||.||....|....|..||     ...:::.||...::|.||:|..||..:.|||..|||.:|. 
 Worm     1 MKFLLRASSLAGQSLRFAS-----QRPKVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTG 60

  Fly    65 -RGIN----GTSYVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYL 124
             :|:.    ...:.||:|||::..|::||||....:|||..||||:.|.||:  ..::|..||.|
 Worm    61 EKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDEN--FDLKHTGPGCL 123

  Fly   125 GMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCG 189
            .|||.||:|||.||::.||...||||.|.|||:|.:||..:..||.:.: ....|.:.|.|::||
 Worm   124 SMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGS-RSGAPAKTVTIADCG 187

  Fly   190 EIPTE 194
            |:.:|
 Worm   188 ELKSE 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:294131 68/167 (41%)
cyn-1NP_506561.1 cyclophilin_ABH_like 22..187 CDD:238907 68/167 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1403619at2759
OrthoFinder 1 1.000 - - FOG0000032
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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