DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and cyn-9

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_497745.1 Gene:cyn-9 / 175471 WormBaseID:WBGene00000885 Length:309 Species:Caenorhabditis elegans


Alignment Length:171 Identity:72/171 - (42%)
Similarity:107/171 - (62%) Gaps:9/171 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICLRGINGT-------SYVGSRFHRVVDRFL 85
            |:::|:..::..:|||...||.:.||||..|||.:|...:..|       .|..:.|||:|.:|:
 Worm     6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFM 70

  Fly    86 VQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDG 150
            :|||||..|||.|..||||.||.||  ...::|:||..|.|||:||::|..||::||..|...:|
 Worm    71 IQGGDITEGDGRGGFSIYGRYFDDE--KFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNG 133

  Fly   151 KHTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGEI 191
            ||.|||:|::|.:.:..|:::..|....|:..|:||||||:
 Worm   134 KHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAKVLISNCGEL 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 69/167 (41%)
cyn-9NP_497745.1 cyclophilin 6..172 CDD:469651 69/167 (41%)

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