DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and cyn-5

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_001379232.1 Gene:cyn-5 / 173374 WormBaseID:WBGene00000881 Length:204 Species:Caenorhabditis elegans


Alignment Length:202 Identity:93/202 - (46%)
Similarity:121/202 - (59%) Gaps:17/202 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKSLLNRIILCSAFLAV--------ASGLSFTVTSRIYMDVKHNKKPVGRITFGLFGKLAPKTVA 57
            |||||    :.:|.|||        |.|..  ||.::|.|::...||:|||..|||||..|||..
 Worm     1 MKSLL----VVAAVLAVGALAQGDDAKGPK--VTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTAT 59

  Fly    58 NFRHICLRGINGTSYVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPG 122
            ||..:..:. .|..|.||:||||:..|::||||...|||||..||||:.|.||:  ..::|...|
 Worm    60 NFIELAKKP-KGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADEN--FKLKHYGAG 121

  Fly   123 YLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISN 187
            :|.|||.|.||||.||::|||...||||:|.||||:|||||.:..||..:....|.|.:.|:|:.
 Worm   122 WLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPGDRPKQDVIIAA 186

  Fly   188 CGEIPTE 194
            .|.|..:
 Worm   187 SGHIAVD 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 78/161 (48%)
cyn-5NP_001379232.1 cyclophilin 29..188 CDD:469651 78/161 (48%)

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