DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaA and cyn-15

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_493378.1 Gene:cyn-15 / 173225 WormBaseID:WBGene00000891 Length:629 Species:Caenorhabditis elegans


Alignment Length:144 Identity:63/144 - (43%)
Similarity:82/144 - (56%) Gaps:12/144 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NKKPV-----GRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGGDIVNGD 95
            ||:.:     |.||..|||...||||.||   |.....| .|.|..||||:..|::|.|| .:|.
 Worm   473 NKEAIIHTSFGDITIRLFGDECPKTVENF---CTHSRRG-YYNGLTFHRVIKSFMIQTGD-PSGK 532

  Fly    96 GTGSISIYGDYFPDEDKALAVEHNRPGYLGMANR-GPDTNGCQFYVTTVGAKWLDGKHTVFGKVL 159
            |||..||:|:.|.||... .:.|::|..:.|||. |.:|||.||::|...|.|||||:|:||:|.
 Worm   533 GTGGESIWGEDFEDEFHP-RLRHDKPFKVSMANAGGGNTNGSQFFITVCPADWLDGKNTLFGEVT 596

  Fly   160 EGMDTIYAIEDVKT 173
            .||..:..|..|.|
 Worm   597 AGMSVVQRINQVST 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 63/144 (44%)
cyn-15NP_493378.1 WD40 53..>285 CDD:475233
WD40 repeat 101..142 CDD:293791
WD40 repeat 150..185 CDD:293791
WD40 repeat 192..237 CDD:293791
cyclophilin 477..626 CDD:469651 61/140 (44%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.