DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and LOC1270014

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:XP_308669.2 Gene:LOC1270014 / 1270014 VectorBaseID:AGAMI1_001469 Length:202 Species:Anopheles gambiae


Alignment Length:180 Identity:85/180 - (47%)
Similarity:110/180 - (61%) Gaps:2/180 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AVASGLSFTVTSRIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRV 80
            |:|||....||.::|.|:....||.|||..||||...|||..||:.:..:...|..|.||:||||
Mosquito    14 ALASGEGPKVTDKVYFDITIGGKPEGRIVIGLFGGTVPKTARNFKELAEKTTKGEGYKGSKFHRV 78

  Fly    81 VDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGA 145
            :..|::||||...|||||..||||:.|.||:  ..::|...|:|.|||.|.||||.||::|....
Mosquito    79 IRDFMIQGGDFTKGDGTGGRSIYGERFADEN--FKLKHYGAGWLSMANAGKDTNGSQFFITVKQT 141

  Fly   146 KWLDGKHTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGEIPTEQ 195
            .||||:|.|||||||||:.:..||...||..|.|...|.|::.|.:|..:
Mosquito   142 SWLDGRHVVFGKVLEGMNVVRKIESTATDGRDRPTNDVEIADSGSLPVSE 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 77/161 (48%)
LOC1270014XP_308669.2 cyclophilin 25..185 CDD:469651 77/161 (48%)

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