DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaA and Cyp40

DIOPT Version :10

Sequence 1:NP_476656.1 Gene:ninaA / 33271 FlyBaseID:FBgn0002936 Length:237 Species:Drosophila melanogaster
Sequence 2:XP_307775.3 Gene:Cyp40 / 1269170 VectorBaseID:AGAMI1_013635 Length:382 Species:Anopheles gambiae


Alignment Length:183 Identity:75/183 - (40%)
Similarity:101/183 - (55%) Gaps:13/183 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICL--RGI---NGT--SYVGSRFHRVVDRFLV 86
            :|:|||..::.||||...|...:.|:|..|||.:|.  |||   .||  .|.||.||||...|:.
Mosquito    22 VYLDVKVGEESVGRIVIELRADVVPRTAENFRALCTGERGIAPDTGTRLHYKGSPFHRVKSLFMS 86

  Fly    87 QGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRG-PDTNGCQFYVTTVGAKWLDG 150
            ||||||:.:|||..||||..|.||:..|..|   .|.:.|||.| ..||..||::|:.....|:|
Mosquito    87 QGGDIVHFNGTGGESIYGKTFEDENFTLLHE---DGAVSMANLGKAHTNNSQFFITSGECPHLNG 148

  Fly   151 KHTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGEI-PTEQFEFYPDD 202
            .:.|.|.|:.|...:..:|....|..| |:.|:||.:||:| |.:.:....||
Mosquito   149 TNVVVGYVIRGGGIVGEMERHSNDDGD-PLVPIVIEDCGQIAPGDDWRVSDDD 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaANP_476656.1 cyclophilin 27..189 CDD:469651 69/167 (41%)
Cyp40XP_307775.3 cyclophilin 20..186 CDD:469651 69/167 (41%)
NrfG <247..352 CDD:443378
TPR repeat 282..314 CDD:276809
TPR repeat 319..347 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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